DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4aa1 and Cyp4f18

DIOPT Version :9

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:530 Identity:158/530 - (29%)
Similarity:257/530 - (48%) Gaps:67/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LILLVISLSIYTFYATLNTY--------LRSVLLSLRLTGPPSLPFL-GNCMLVTDKD---LMRR 71
            |:||::..|....|.....|        ||      |...||:..:| |:..|:...:   |..:
  Rat    20 LLLLLVGASCLLAYILPQVYAVFENSRRLR------RFPQPPTRNWLFGHLGLIQSSEEGLLYIQ 78

  Fly    72 CAGKAF-DLYGSLVRIWVLLFPFFAVLEPEDLQVIL---SSKKHTNKVFFYRLMHNFLGDGLITS 132
            ...:.| |:....|..|   .|...:..|..::.::   :|....::| |||.:..:|||||:.|
  Rat    79 SLSRTFRDVCCWWVGPW---HPVIRIFHPAFIKPVILAPASVAPKDRV-FYRFLKPWLGDGLLLS 139

  Fly   133 SGSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLD--AEAVGTEINIAKYVNNCVLDILN 195
            :|.|||.||.::.||||.|:|:.::..|.|::..::....  |......:::.::::...||.|.
  Rat   140 TGDKWSRHRHMLTPAFHFNILKPYVKIFNDSTNIMHAKWQRLASQGSARLDMFEHISLMTLDSLQ 204

  Fly   196 EAVLGVPI----KKRGQDVAMMEDSPFRQGKIMMPARFTQPWLL-LDGIYHWTKMANDELNQKKR 255
            :.|.....    |......|::|.|       .:.||..|..|| :|..||.|:   |.:..:|.
  Rat   205 KCVFSFDSNCQEKPSEYITAILELS-------ALVARRHQSLLLYVDLFYHLTR---DGMRFRKA 259

  Fly   256 ---LNDFTRKMIQRRRQIQNNNNGNSERKC-----LLDH----MIEISESNRDFTEEDIVNEACT 308
               ::|||..:|:.||:...:..|:...|.     .||.    ::...|.....::|||..||.|
  Rat   260 CRLVHDFTDAVIRERRRTLPDQGGDDALKAKAKAKTLDFIDVLLLSKDEHGEALSDEDIRAEADT 324

  Fly   309 FMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAP---TMTDLHEMRYMEMCIKE 370
            ||..|.|:..:.:::.|:.|.::||.|:||..|:..:..|  |.|   ...||.::.::.|||||
  Rat   325 FMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRD--REPEEIEWDDLAQLPFLTMCIKE 387

  Fly   371 ALRLYPSVPLIARKLGEEVRLAK-HTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSEN 434
            :|||:|....|:|...:::.|.. ..:|.|....|..:.||....::||||.:.|.||..:|.|.
  Rat   388 SLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEVYNPFRFDADNGEG 452

  Fly   435 RHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGLWVR 499
            |.|.||:|||||||.|||..||:.|:|..::..|..:::||...:.....  .:.|||.||||:|
  Rat   453 RSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRRKP--ELILRAEGGLWLR 515

  Fly   500 LKERDHPLIA 509
            ::    ||.|
  Rat   516 VE----PLSA 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 p450 50..475 CDD:278495 136/455 (30%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 140/458 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348453
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.