DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and Cyp24a1

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_963966.1 Gene:Cyp24a1 / 25279 RGDID:2462 Length:514 Species:Rattus norvegicus


Alignment Length:475 Identity:102/475 - (21%)
Similarity:201/475 - (42%) Gaps:94/475 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LTGPPSLPFLGNCMLVTDKDLMRR---CAGKAFDLYGSLVRIWVLLFPFFAVLEPEDLQVILSS- 108
            |.||.:.|.||:.:.:..|..:::   ...:....||.:.|:.:..|....:..|..|:.:..: 
  Rat    58 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE 122

  Fly   109 ---------------KKHTNKVFFYRLMHNFLGDGLITSSGSKWSN-----HRRLIQPAFHHNLL 153
                           :.|.|:.:           ||:...|.:|..     .::|::|.....|.
  Rat   123 SAHPQRLEIKPWKAYRDHRNEAY-----------GLMILEGQEWQRVRSAFQKKLMKPVEIMKLD 176

  Fly   154 EKFIDTFVDASQSLYENLDAEA----VGTEINIAKYVNNCVLDILNEAVLGVPIKKRGQDVAMME 214
            :|..:...|..:.:.|..|...    :.:|:|...:.:.|:  :|.|...|: ::|..::.|:..
  Rat   177 KKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICL--VLYEKRFGL-LQKETEEEALTF 238

  Fly   215 DSPFRQ-----GKIMM-PARF-----TQPW----LLLDGIYHWTKMANDELNQKKRLN-----DF 259
            .:..:.     ||:|: |...     |:.|    |..|.|:...|...|  |:.:|.:     ||
  Rat   239 ITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCID--NRLQRYSQQPGADF 301

  Fly   260 TRKMIQRRRQIQNNNNGNSERKCLLDHMIEISESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFT 324
            ...:.|:                  ||:          :::::........||..::...::.:.
  Rat   302 LCDIYQQ------------------DHL----------SKKELYAAVTELQLAAVETTANSLMWI 338

  Fly   325 LFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEV 389
            |:.|::||:.|.|.:.|:.::..| |:.|...||..|.|::.|:||::||.||||...|.|.:..
  Rat   339 LYNLSRNPQAQRRLLQEVQSVLPD-NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPT 402

  Fly   390 RLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYAFLPFSAGPRYCIGNR 454
            .|.::.||.|:.:.:...........:.|..||:|||:. :..:..:|:|.|||..|.|.|||.|
  Rat   403 VLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWL-QKEKKINPFAHLPFGIGKRMCIGRR 466

  Fly   455 FAIMEIKTIVSRLLRSYQLL 474
            .|.:::...:..:::.|.::
  Rat   467 LAELQLHLALCWIIQKYDIV 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 94/439 (21%)
Cyp24a1NP_963966.1 CYP24A1 90..508 CDD:410738 95/443 (21%)

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