DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and Cyp4x1

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_663708.1 Gene:Cyp4x1 / 246767 RGDID:628719 Length:507 Species:Rattus norvegicus


Alignment Length:505 Identity:150/505 - (29%)
Similarity:253/505 - (50%) Gaps:39/505 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILLVISLSIYTFYATLNTYLR--SVLLSLR-LTGPPSLPFLGNCMLVTDKDLMRRCAGKAFDLYG 81
            :.||..|::....| :..|||  .:|..|| ..||.:...||:...:.:.::         :...
  Rat    16 LALVFCLALVLMQA-VKLYLRRQRLLRDLRPFPGPTAHWLLGHQKFLQEDNM---------EKLD 70

  Fly    82 SLVRIWVLLFP--------FFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLGDGLITSSGSKWS 138
            .:|:.:...||        ||.:.:|:..::.| |:......:.::||..|||.||:...|.:|.
  Rat    71 EIVKEYPCAFPCWVGPFQAFFYIYDPDYAKIFL-SRTDPKTQYLHQLMTPFLGRGLLNLDGPRWF 134

  Fly   139 NHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDA--EAVGTEINIAKYVNNCVLDILNEAVLG- 200
            .||.|:.||||.::|:..:|....:...:.:..:.  ....|.|.:.:::|...|||:.:...| 
  Rat   135 QHRCLLTPAFHQDILKPCVDMMAHSVNMMLDKWEKTWTTQETTIEVFEHINLMTLDIIMKCAFGQ 199

  Fly   201 -VPIKKRGQDVAMMEDSPFRQGKIMMPARFTQPWLLLDGIYHWTKMANDELNQKKRLNDFTRKMI 264
             ...:..|...:.:: :.|..|:| :.:|....|...|.|:..:...:......|.::..|.|:|
  Rat   200 ETNCQINGTYESYVK-ATFELGEI-ISSRLYNFWHHHDIIFKLSPKGHCFQELGKVIHQCTEKII 262

  Fly   265 QRRRQI---QNNNNGNSERKCLLDHMIEISESN-RDFTEEDIVNEACTFMLAGQDSVGAAVAFTL 325
            |.|::.   |.|.:.....:..||.::.....: :.|::.|:.:|..|||.||.|:..|::::.|
  Rat   263 QDRKKTLKDQVNQDDTQTSQNFLDIVLSAQAGDEKAFSDADLRSEVNTFMWAGHDASAASISWLL 327

  Fly   326 FLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEVR 390
            :.|..|||.||||..|:.:|..|.: :.|...|.|:.|..|||||.|||.|.:|.|:|:|.:.:.
  Rat   328 YCLALNPEHQDRCRTEIRSILGDGS-SITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLT 391

  Fly   391 LAK-HTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYAFLPFSAGPRYCIGNR 454
            |.. |:||||..|.:..:..|....::.||:.|.|.||:.||||.|||.||||||:|||.|||.:
  Rat   392 LPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKVFDPLRFTKENSEQRHPCAFLPFSSGPRNCIGQQ 456

  Fly   455 FAIMEIKTIVSRLLRSYQLLPVTGKTTIAATF--RITLRASGGLWVRLKE 502
            ||::|:|..::..|..::   |....|....|  ...||...|:::.||:
  Rat   457 FAMLELKVAIALTLLRFR---VAADLTRPPAFSSHTVLRPKHGIYLHLKK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 134/435 (31%)
Cyp4x1NP_663708.1 CYP4B-like 66..500 CDD:410771 134/449 (30%)

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