DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4aa1 and Cyp4b1

DIOPT Version :9

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus


Alignment Length:525 Identity:147/525 - (28%)
Similarity:245/525 - (46%) Gaps:79/525 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SILILLVISLSIYTFYATLNTYLRSVLLSLRL---TGPPSLPFLGNCMLVTDKDLMRRCAGKAFD 78
            |::||:||.|.:::.      .||...|:..:   .|||:....|:.:.:              .
  Rat    18 SVVILMVIVLKLFSL------LLRRQKLARAMDSFPGPPTHWLFGHALEI--------------Q 62

  Fly    79 LYGSLVRI--WVLLFP------------FFAVLEPEDLQVILSSKKHTNKVFFYRLMHNFLGDGL 129
            ..|||.::  |...||            |..:.||:..:.:. |:........|.....::|.||
  Rat    63 KLGSLDKVVSWAQQFPHAHPLWFGQFVGFLNIYEPDYAKAVY-SRGDPKAADVYDFFLQWIGKGL 126

  Fly   130 ITSSGSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDAEA-VGTEINIAKYVNNCVLDI 193
            :...|.||..||:|:.|.||:::|:.::..|.::::.:.:..:.:| .....:|...|.:..||.
  Rat   127 LVLDGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDT 191

  Fly   194 LNEAVLGVPIKKRGQDVAMMEDSPFRQG----KIMMPARFTQPWLLLDGIYHWT----------K 244
            |.:...|     :|.......|:.:...    .::|..|........|.||..|          |
  Rat   192 LMKCTFG-----KGDSGLGHRDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACK 251

  Fly   245 MANDE----LNQKKRL--NDFTRKMIQRRRQIQNNNNGNSERKCLLDHMIEI-SESNRDFTEEDI 302
            :|:|.    :.|:|..  ::..||.||:||.:.           .||.::.: .||....::.::
  Rat   252 IAHDHTDEVIRQRKAALQDEKERKKIQQRRHLD-----------FLDILLGVRDESGIKLSDAEL 305

  Fly   303 VNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMC 367
            ..|..|||..|.|:..:.:::.|:.:...||.|..|..|:..|..|.: :....||.:|.|:.||
  Rat   306 RAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQD-SFQWDDLAKMTYLTMC 369

  Fly   368 IKEALRLYPSVPLIARKLGEEVRLAK-HTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPEN 431
            :||..||||.||.:.|:|.:.|.... .:|||||.:.:..||.||.:.::||||.|.|.||||||
  Rat   370 MKECFRLYPPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPEN 434

  Fly   432 SENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAATFRITLRASGGL 496
            :..|||:||:|||||||.|||.:||:.|:|.:.:..|..::......|..|... ::.||:..|:
  Rat   435 AAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSLDPSKMPIKVP-QLILRSKNGI 498

  Fly   497 WVRLK 501
            .:.||
  Rat   499 HLYLK 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 p450 50..475 CDD:278495 131/461 (28%)
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 136/485 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348456
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.