DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and cyp-13A8

DIOPT Version :10

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:543 Identity:128/543 - (23%)
Similarity:231/543 - (42%) Gaps:93/543 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LILLVISLSIYTFYATLNTYLRSVLLSLRLTGPPSLPFLGNCMLVTDKDL--------MRRCAGK 75
            :|..:|.:||.|:|....|:.:    ...|.||..:|..|....:.:...        ..:..||
 Worm     1 MIFELILISIVTYYFWHWTFWK----RRGLPGPWGVPIFGKAGAMLEDSFPPGYTLQKWTKEYGK 61

  Fly    76 AFDLYGSLVRIWVLLFPFFAVLEPEDLQVILSSKKHTNKVFFYRLMHN-FLGD-------GLITS 132
            .:.....:.::.|       :.:|:.:|.|| .|::.|   ||...|| ..||       .::.:
 Worm    62 IYGFTEGMQKVMV-------ISDPDLVQEIL-VKQYDN---FYGRKHNPVQGDPDKDKDIHIVGA 115

  Fly   133 SGSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDAEAV-GTEINIAKYVNNCVLDILNE 196
            .|.:|...|.:..|||.:..::|.:.|..|::|.|.:.|..|:. |..:|:..:......|:::.
 Worm   116 QGFRWKRLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREESENGKAVNMHLFYQEYTFDVISR 180

  Fly   197 AVLGVPIKKRGQDVAMMEDSPFRQGKIMMPARFTQPWLLLDG------IYHW------------- 242
            ..:|.|      |..|.::...:..|........|.|:...|      ...|             
 Worm   181 VAMGQP------DSQMFKNPLLKDVKGFFEHNRWQIWMFSGGFPFAVSFLKWLFIKVGKFGAGPF 239

  Fly   243 ------------TKMANDELNQKKRLN-----DFTRKMIQRRRQIQNNNNGNSERKCLLDHMIEI 290
                        :::|..|.::|..:.     |:....:..|.::::....|.|     .|. ..
 Worm   240 IVVQKSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNARAEVEHFGESNDE-----FHK-SS 298

  Fly   291 SESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTM 355
            |.:||..|.::|:::...|::||.|:...::::..:.|..||:.|.:...|:..  |..|...|.
 Worm   299 SYNNRQLTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDK--ECPNDEITF 361

  Fly   356 TDLHEMRYMEMCIKEALRLYPSVPLI-ARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIY-PD 418
            ..|.:::||:..|||:|||:|..... :|:......:.:..:.||.:|.|..:..|...::: .|
 Worm   362 DQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGND 426

  Fly   419 PEKFQPERF-SPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKT-- 480
            .|:|:|||: ||...:.    |:|.|.||||.|:|.|||::|.|.::|.:|:.| ......||  
 Worm   427 VEEFKPERWDSPLTPQQ----AYLSFGAGPRVCLGMRFALLEQKGLLSHILKKY-TFETNAKTQL 486

  Fly   481 TIAATFRITLRASGGLWVRLKER 503
            .|....|.|.|.. .|::.||.|
 Worm   487 PIKLVGRATARPE-NLFLSLKPR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 CYP4 81..498 CDD:410721 111/466 (24%)
cyp-13A8NP_496115.1 CYP3A-like 58..500 CDD:410678 112/472 (24%)

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