DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and Cyp4a12b

DIOPT Version :9

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus


Alignment Length:538 Identity:156/538 - (28%)
Similarity:260/538 - (48%) Gaps:98/538 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LELCSILILLVISLSIYTFYATLNTYL-RSVLLS--LRLTGPPSLPFLGNCMLVTD--KDLMRRC 72
            |::.|:|.||::      .:.|...|| |..|||  .:...|||....|:.:|...  :|::.|.
Mouse    19 LQVASVLSLLLL------LFKTAQLYLHRQWLLSSTQQFPSPPSHWLFGHKILKDQDLQDILTRI 77

  Fly    73 AGKAFD------LYGSLVRIWVLLFPFFAVLEPEDLQVIL---SSKKHTNKVFFYRLMHNFLGDG 128
              |.|.      |:||.|||        .|.:|:.:::||   ..|.|.:    ||.:..::|.|
Mouse    78 --KNFPSACPQWLWGSKVRI--------QVYDPDYMKLILGRSDPKAHGS----YRFLAPWIGRG 128

  Fly   129 LITSSGSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLD--AEAVGTE--INIAKYVNNC 189
            |:...|..|..|||::.||||:::|:.:.:...|   |::..||  .:.||.:  :.|.:::...
Mouse   129 LLLLDGQTWFQHRRMLTPAFHYDILKPYTEIMAD---SVHVMLDKWEQIVGQDSTLEIFQHITLM 190

  Fly   190 VLDILNEAVLGVPIKKRGQDVAMMEDSPFRQGKIMMPARFTQP-----------WLLLDGIYHWT 243
            .||.:.:....                  .:|.:.:..::...           :|.:..|:|  
Mouse   191 TLDTIMKCAFS------------------HEGSVQLDRKYKSYIQAVEDLNNLFFLRVRNIFH-- 235

  Fly   244 KMANDEL----------NQKKRL-NDFTRKMIQ-RRRQIQNNNN-GNSERKCLLDHMIEI----- 290
              .||.:          |...:| :|.|.::|: ||.|:|:... ...::|..|| .::|     
Mouse   236 --QNDIIYRVSSNGCLANSACQLAHDHTDQVIKSRRSQLQDEEELEKLKKKRRLD-FLDILLFAR 297

  Fly   291 SESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTM 355
            .|:.:..:::|:..|..|||..|.|:..:.:::..:.|..|||.|.||..|:.::..| ..:.|.
Mouse   298 MENGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLGD-GASITW 361

  Fly   356 TDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAK-HTLPAGSNVFICPYATHRLAHIYPDP 419
            .||.:|.|..||||||||:||.||.::|:|...|.... .:||.|.:|.:..|..|....::|:|
Mouse   362 NDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNP 426

  Fly   420 EKFQPERFSPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTGKTTIAA 484
            |.|.|.||:|.:|  ||.::|||||.|.|.|||.:||:.|:|..|:..|..::|||...:..|..
Mouse   427 EVFDPSRFAPGSS--RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRVPIPI 489

  Fly   485 TFRITLRASGGLWVRLKE 502
            . ||.|::..|:.:.||:
Mouse   490 P-RIVLKSKNGIHLHLKK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 p450 50..475 CDD:278495 135/469 (29%)
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 137/476 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844970
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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