DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4aa1 and cyp26c1

DIOPT Version :9

Sequence 1:NP_611067.2 Gene:Cyp4aa1 / 36752 FlyBaseID:FBgn0034053 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_031761583.1 Gene:cyp26c1 / 100489980 XenbaseID:XB-GENE-1219115 Length:608 Species:Xenopus tropicalis


Alignment Length:592 Identity:118/592 - (19%)
Similarity:200/592 - (33%) Gaps:177/592 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LILLVISLSIYTFYATLNTYLRSVLL--------SLRL-------------TGPPSLPFLGNCM- 61
            :.||.||.:.: |.|.|.:.|..|||        |||.             .|....||.|..: 
 Frog     1 MFLLEISYTSF-FEAALTSALSLVLLLAASHQLWSLRWHSTRDRGSSLPLPKGSMGWPFFGETLH 64

  Fly    62 -LVTDKDLMRRCAGKAF-----DLYGSLVRIWVLLFPFFAVLEPEDLQVILSSKKHTNKVFFYRL 120
             ||         .|.:|     :.||::.:..:|..|...|...|:::.||..:.|.....:.:.
 Frog    65 WLV---------QGSSFHSSRREKYGNIFKTHLLGKPVIRVTGAENIRKILLGEHHLVSTQWPQS 120

  Fly   121 MHNFLGDGLITSS-GSKWSNHRRLIQPAFHHNLLEKFIDTFVDASQSLYENLDAEAVGTEINIAK 184
            ....||...:::| |......|:::........||.::....:|.:....:. ...|| .:::..
 Frog   121 TQIILGSNTLSNSIGELHRQKRKMMSKVLSSAALESYLPRIHEAVRWEVRSW-CRGVG-PVSMLS 183

  Fly   185 YVNNCVLDILNEAVLGVPIKKRGQDVAMME-DSPFRQGKIMMPARFTQPWLLLD----GIYHWTK 244
            ........|....:||:.:    .|....| ...|.|   ::...|..|   ||    |:....|
 Frog   184 CAKALTFRIAARILLGLSL----TDTQFQELTRTFEQ---LVENLFCLP---LDIPFSGLRKGMK 238

  Fly   245 MANDELNQKKRLNDFTRKMIQRRRQIQNNNNGNSERKC--LLDHMI-EISESNRDFTEEDIVNEA 306
             |.|.|:|  .:.:..::.:.:|          ....|  .||::| ...|..::...:::...|
 Frog   239 -ARDTLHQ--YMEEAIKEKLSKR----------DPDACEDALDYLINSAKEGGKEINMQELKESA 290

  Fly   307 CTFMLAG-QDSVGAAVAFTLFLL----------------------------TQNPE--------- 333
            ...:.|. ..:..|:.:..|.||                            |:||.         
 Frog   291 IELIFAAFLTTASASTSLVLLLLKHPSAIHKIRQELASHGLSEHCEQCLPATENPNNNILQDNGH 355

  Fly   334 ------CQDRCVL----ELATIFED--------------------------------------SN 350
                  ||...|:    ::.|::|.                                      ||
 Frog   356 QCLTAGCQLPLVMGTEGQVKTLWEQTKQLLTDRTDQDPQNSLSSKNLVNGENRIQEAPCSHDKSN 420

  Fly   351 RAP------------------TMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAKHTLP 397
            .:|                  ::..|..:.|::..:||.|||.|.|....|...:...|..:.:|
 Frog   421 CSPVPGKLQNSVFEGTCQQNISLEKLKSLHYLDCVVKEVLRLLPPVSGGYRTALQTFELDGYQIP 485

  Fly   398 AGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENR-HPYAFLPFSAGPRYCIGNRFAIMEIK 461
            .|.:|......||..|.:|.:.|.|.|||||.|..|.: ..:.::||..|.|.|||...|.:.:|
 Frog   486 KGWSVMYSIRDTHETAAVYQNAEMFDPERFSTERDEGKLGRFNYIPFGGGARSCIGKELAQIILK 550

  Fly   462 TIVSRLL 468
            .:...|:
 Frog   551 ILAMELV 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4aa1NP_611067.2 p450 50..475 CDD:278495 104/540 (19%)
cyp26c1XP_031761583.1 cytochrome_P450 59..588 CDD:425388 101/533 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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