DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8299 and prtn3

DIOPT Version :9

Sequence 1:NP_611066.1 Gene:CG8299 / 36751 FlyBaseID:FBgn0034052 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:253 Identity:71/253 - (28%)
Similarity:131/253 - (51%) Gaps:23/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAALGVVILT--DSASISTHIVGGDQADIADFPYQVSVRLETYMLLHICGGSIYAPRVVITAAH 71
            ||..|.::..:  :..|:.|.||||.:|.....||..|::|..   .|.||||:.||:.::||||
 Frog     5 LLVTLSILWASQVNGGSMHTQIVGGREATPNSHPYIASLQLRG---RHFCGGSLIAPQFLMTAAH 66

  Fly    72 CIKGRYASYIRIVAGQNSIA--DLEEQGVKVSKLIPHAGYNKKTYVNDIGLIITREPLEYSALVQ 134
            |::...::.:.:|.|.:|:.  :..:|..:|:::..: |:|..|..|||.::....|:..:..||
 Frog    67 CMENTASNLVTVVLGAHSLRANEATKQRFRVNQVFEN-GFNPLTLQNDIVILKLDRPVSLNGKVQ 130

  Fly   135 PIAV--ALEAPPSGAQAVVSGWGKRAEDDEALPAMLRAVELQIIEKSTCGAQYLTKDYTVTDEML 197
            .:::  |.|..|:|.|.|.:|||:.:.:.: :|..|:.:.:.:..::.|           ....:
 Frog   131 VVSLPSANEDVPAGTQCVTAGWGRLSTEGQ-IPDRLQELNVTVTRQNLC-----------RPNNI 183

  Fly   198 CAGYLEGGKDTCNGDSGGPLAVDGVLVGVVSWGV-GCGREGFPGVYTSVNSHIDWIEE 254
            |.|........|.|||||||..:||:.|:.|:.: .||....|..::.|:....:|::
 Frog   184 CTGVFMQQAGICFGDSGGPLVCNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFIDD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8299NP_611066.1 Tryp_SPc 27..252 CDD:214473 65/229 (28%)
Tryp_SPc 28..255 CDD:238113 66/232 (28%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 66/230 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.