DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8299 and F12

DIOPT Version :10

Sequence 1:NP_611066.1 Gene:CG8299 / 36751 FlyBaseID:FBgn0034052 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:243 Identity:89/243 - (36%)
Similarity:123/243 - (50%) Gaps:21/243 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IVGGDQADIADFPYQVSVRLETYMLLHICGGSIYAPRVVITAAHCIKGRYA-SYIRIVAGQNSIA 91
            :|||..|.....||..::    |.....|.||:..|..|:|||||::.|.| ..:.:|.||:...
  Rat   362 VVGGLVALPGSHPYIAAL----YWGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHN 422

  Fly    92 DLEE--QGVKVSKLIPHAGYNKKTYVNDIGLIITREPLEYSAL----VQPIAVALEAPPSGAQAV 150
            ...|  |.:.|.....|.|::.|||.:|:.|:..|......|:    |||:.:...|.|.....:
  Rat   423 QSCERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVL 487

  Fly   151 --VSGWGKRAEDDEALPAMLRAVELQIIEKSTCGAQYLTKDYTVTDEMLCAGYLEGGKDTCNGDS 213
              |:|||.:.|..|.....|:..::..|....|.:..:..| .:...|||||:||||.|.|.|||
  Rat   488 CEVAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVHGD-AILPGMLCAGFLEGGADACQGDS 551

  Fly   214 GGPLAVD-GV------LVGVVSWGVGCGREGFPGVYTSVNSHIDWIEE 254
            ||||..| ||      |.||:|||.|||....|||||.|.:::|||:|
  Rat   552 GGPLVCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWIQE 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8299NP_611066.1 Tryp_SPc 27..252 CDD:214473 86/239 (36%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 89/243 (37%)
Blue background indicates that the domain is not in the aligned region.

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