DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8299 and svh-1

DIOPT Version :9

Sequence 1:NP_611066.1 Gene:CG8299 / 36751 FlyBaseID:FBgn0034052 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:248 Identity:88/248 - (35%)
Similarity:127/248 - (51%) Gaps:41/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IVGGDQADIADFPYQVSVRLETYMLLHICGGSIYAPRVVITAAHCIK--GRYASYIRIVAG--QN 88
            :|||.:.....||:..::|.:. ...|.||.||.....:||||||.:  .|.:|| .:|.|  .|
 Worm   713 VVGGFETVPGAFPWTAALRNKA-TKAHHCGASILDKTHLITAAHCFEEDERVSSY-EVVVGDWDN 775

  Fly    89 SIADLEEQGVKVSKLIPHAGYNKKTYVNDIGLIITREP-LEYSALVQPIAVALEAPPS------- 145
            :..|..||...:.::..:..| |..:.:||.::....| :|::...|||.:     ||       
 Worm   776 NQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICL-----PSKDFVYTP 834

  Fly   146 GAQAVVSGWG----KRAEDDEALPAMLRAVELQIIEKSTC--GAQYLTKDYTVTDEMLCAGYLEG 204
            |.|.||||||    :.||       .|:|..:.||.:..|  .:|..:   :::....|||||||
 Worm   835 GRQCVVSGWGSMGLRYAE-------RLQAALIPIINRFDCVNSSQIYS---SMSRSAFCAGYLEG 889

  Fly   205 GKDTCNGDSGGPLAV---DG--VLVGVVSWGVGCGREGFPGVYTSVNSHIDWI 252
            |.|:|.||||||.|.   ||  ||.||:|||.||.::..||:||.|..::.||
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8299NP_611066.1 Tryp_SPc 27..252 CDD:214473 86/246 (35%)
Tryp_SPc 28..255 CDD:238113 88/248 (35%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 88/248 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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