DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a2

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:688 Identity:157/688 - (22%)
Similarity:270/688 - (39%) Gaps:142/688 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 DQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQ----WPHAGSRTLALIGCTLGVFNM 517
            ||.|:  |....|..:....::..:.:|.||..:.| ::|    |.......|:::|..:.:.|:
  Rat    18 DQLPE--QPLRPCKTADLLVVKEHNGVQCLLASQDG-DAQPRETWGKKIDFLLSVVGFAVDLANV 79

  Fly   518 CRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIALVMQ 581
            .||..|.. |.||.||:.:.|..:|.|:||.::::.||...|.|..::|||.|...|||.|:::.
  Rat    80 WRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQFNREGAATVWKICPFFKGVGYAVILI 144

  Fly   582 QCFLALYSTVSLAWILVYLRDVFPTA---ARSGYRWQ--EMAFPYRYDASNATGNLTQ------- 634
            ..::..|..|.:||.|.||...|...   ...|:.|.  ....|...:|| ..|:.|:       
  Rat   145 ALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHAWNSPNCTDPKLLNAS-VLGDHTKYSKYKFT 208

  Fly   635 TVAEYFNVVVLQRLHLANHPDASGIR-FHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIY 698
            ..||::...|| .||     ::|||. ..:...||...|.::...::..|.||:|:.||:.:|..
  Rat   209 PAAEFYERGVL-HLH-----ESSGIHDIGLPQWQLLLCLMVVIVVLYFSLWKGVKTSGKVVWITA 267

  Fly   699 TLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSNSW-TAATQETFLTWGLLGASVIAIT 762
            |||...|.|:....|.:...|...|.:...||.. |..:..| .||||                 
  Rat   268 TLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYR-LKEATVWIDAATQ----------------- 314

  Fly   763 SRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSL 827
                                :|..:|.|...|:|..        .|    ..|:| :||..  :|
  Rat   315 --------------------IFFSLGAGFGVLIAFA--------SY----NKFDN-NCYRD--AL 344

  Fly   828 QSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVES-GFQALRFISEIFPAVLSLASDSISWV 891
            .::|    ::...|.|..::.|....|..:...:.:|. ..:....:..::|..:|..|.|.  .
  Rat   345 LTST----INCVTSFISGFAIFSILGYMAHEHKVKIEDVATEGAGLVFVLYPEAISTLSGST--F 403

  Fly   892 WAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSV---------------LLSCVTGL---LLSI 938
            ||.:.|......||          .|::|...:.:               |.:|...|   ||::
  Rat   404 WAVLFFLMLLALGL----------DSSMGGMEAVITGLADDFQVLKRHRKLFTCAVTLGTFLLAM 458

  Fly   939 PFATEMGISILYYVD-FLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVNDL-RLCG-SMSAFL 1000
            ...|:.||.:|..:| |..|.|....::..|  .||...    |..|...||: ::.| ....:.
  Rat   459 FCITKGGIYVLTLLDTFAAGTSILFAVLMEA--IGVSWF----YGVDRFSNDIQQMMGFKPGLYW 517

  Fly  1001 ALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAII 1062
            .|.|..:.|   :.::.:|::::|....:.:.|       ..|:..:|..|.:..::::|...  
  Rat   518 RLCWKFVSPAFLLFVVVVSIINFKPLTYDDYVY-------PPWANWVGWGIALSSMILVPAYV-- 573

  Fly  1063 QIYRYLA-HGPPDILERIQLLYRPPEEGEEPRRPSARQ 1099
             ||::.: .|  .:.||:.....|..|.....:...||
  Rat   574 -IYKFFSIRG--SLWERVAYGITPENEHHLVAQRDVRQ 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 122/509 (24%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:444915 147/647 (23%)

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