DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a2

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:688 Identity:157/688 - (22%)
Similarity:270/688 - (39%) Gaps:142/688 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 DQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQ----WPHAGSRTLALIGCTLGVFNM 517
            ||.|:  |....|..:....::..:.:|.||..:.| ::|    |.......|:::|..:.:.|:
  Rat    18 DQLPE--QPLRPCKTADLLVVKEHNGVQCLLASQDG-DAQPRETWGKKIDFLLSVVGFAVDLANV 79

  Fly   518 CRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIALVMQ 581
            .||..|.. |.||.||:.:.|..:|.|:||.::::.||...|.|..::|||.|...|||.|:::.
  Rat    80 WRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQFNREGAATVWKICPFFKGVGYAVILI 144

  Fly   582 QCFLALYSTVSLAWILVYLRDVFPTA---ARSGYRWQ--EMAFPYRYDASNATGNLTQ------- 634
            ..::..|..|.:||.|.||...|...   ...|:.|.  ....|...:|| ..|:.|:       
  Rat   145 ALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHAWNSPNCTDPKLLNAS-VLGDHTKYSKYKFT 208

  Fly   635 TVAEYFNVVVLQRLHLANHPDASGIR-FHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIY 698
            ..||::...|| .||     ::|||. ..:...||...|.::...::..|.||:|:.||:.:|..
  Rat   209 PAAEFYERGVL-HLH-----ESSGIHDIGLPQWQLLLCLMVVIVVLYFSLWKGVKTSGKVVWITA 267

  Fly   699 TLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSNSW-TAATQETFLTWGLLGASVIAIT 762
            |||...|.|:....|.:...|...|.:...||.. |..:..| .||||                 
  Rat   268 TLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYR-LKEATVWIDAATQ----------------- 314

  Fly   763 SRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSL 827
                                :|..:|.|...|:|..        .|    ..|:| :||..  :|
  Rat   315 --------------------IFFSLGAGFGVLIAFA--------SY----NKFDN-NCYRD--AL 344

  Fly   828 QSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVES-GFQALRFISEIFPAVLSLASDSISWV 891
            .::|    ::...|.|..::.|....|..:...:.:|. ..:....:..::|..:|..|.|.  .
  Rat   345 LTST----INCVTSFISGFAIFSILGYMAHEHKVKIEDVATEGAGLVFVLYPEAISTLSGST--F 403

  Fly   892 WAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSV---------------LLSCVTGL---LLSI 938
            ||.:.|......||          .|::|...:.:               |.:|...|   ||::
  Rat   404 WAVLFFLMLLALGL----------DSSMGGMEAVITGLADDFQVLKRHRKLFTCAVTLGTFLLAM 458

  Fly   939 PFATEMGISILYYVD-FLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVNDL-RLCG-SMSAFL 1000
            ...|:.||.:|..:| |..|.|....::..|  .||...    |..|...||: ::.| ....:.
  Rat   459 FCITKGGIYVLTLLDTFAAGTSILFAVLMEA--IGVSWF----YGVDRFSNDIQQMMGFKPGLYW 517

  Fly  1001 ALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAII 1062
            .|.|..:.|   :.::.:|::::|....:.:.|       ..|:..:|..|.:..::::|...  
  Rat   518 RLCWKFVSPAFLLFVVVVSIINFKPLTYDDYVY-------PPWANWVGWGIALSSMILVPAYV-- 573

  Fly  1063 QIYRYLA-HGPPDILERIQLLYRPPEEGEEPRRPSARQ 1099
             ||::.: .|  .:.||:.....|..|.....:...||
  Rat   574 -IYKFFSIRG--SLWERVAYGITPENEHHLVAQRDVRQ 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 122/509 (24%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:382020 147/647 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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