DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and slc6a3

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:778 Identity:188/778 - (24%)
Similarity:290/778 - (37%) Gaps:232/778 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 LAQSRPQSAPTRVQMREPQLQDTPTHPIMSTCSELSSARSSRMPSPVSLPSD-----SSSS---- 449
            :.:.||....||          |.||..||:.|..|||...|....|.:...     :|||    
Zfish     3 MLRGRPAVTHTR----------TRTHTHMSSVSGSSSAAGPREVELVLVKEQNGVQFTSSSLRNP 57

  Fly   450 GSSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGV 514
            |:.|..|                :.|...|..|.:....:|..|          .|::||..:.:
Zfish    58 GAHSHTH----------------THTHTHPSGQQRETWGKKIDF----------LLSVIGFAVDL 96

  Fly   515 FNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIAL 578
            .|:.||..|.. |.||.||:.:||..||.|:||.::::.||...|.|...:|||.||..|||..:
Zfish    97 ANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQYNREGAAGVWKICPIFKGVGFTV 161

  Fly   579 VMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRY--------DASNATGNL--- 632
            ::...::..|..|.:||.|.||...|     ||      ..|:.:        :.|:....|   
Zfish   162 ILISLYVGSYYNVIIAWALFYLFSSF-----SG------ELPWIHCNNTWNSPNCSDPNATLLND 215

  Fly   633 ---TQTVAEYFNVVVLQRLHLANHPDASGIRFHVNDR-----QLAFYLALIWAAVFLILCKGLKS 689
               |....|||...|| .:|     ::|||    :|.     ||...||::...::..|.||:|:
Zfish   216 TYKTTPALEYFERGVL-HVH-----ESSGI----DDLGAPRWQLTACLAVVIVVLYFSLWKGVKT 270

  Fly   690 LGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDF-LVNSNSW-TAATQETFLTWG 752
            .||:.:|..|:|.|.|.|:..:.|.:  |..|..|.|....|.. |.::..| .||||       
Zfish   271 SGKVVWITATMPYVVLTVLLLRGVTL--PGAIDGIKAYLSVDFLRLYDAQVWIEAATQ------- 326

  Fly   753 LLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFEN 817
                                         :.|:| |:|...|:|.        ..|    ..|.|
Zfish   327 -----------------------------ICFSL-GVGFGVLIAF--------SSY----NKFSN 349

  Fly   818 PDCY------TSIYSLQSNTNPYLLSYPRSLIPHYSSFIG-ETYRRNRTMIHVESGFQALRFISE 875
             :||      :||.||.|..:.:::          .||:| .:.:.|..:..|.:....|.||  
Zfish   350 -NCYRDAIITSSINSLTSFFSGFVI----------FSFLGYMSQKHNVALDKVATDGPGLVFI-- 401

  Fly   876 IFP-AVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSV------------- 926
            |:| |:.:|...|   |||.:.|......|          |.||:|...|.:             
Zfish   402 IYPEAIATLPGSS---VWAVIFFIMLLTLG----------IDSAMGGMESVITGLIDEFKFLHKH 453

  Fly   927 -----LLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFL-------IRGR 979
                 |...|:..|:|:...|..||.:...:|....|        |:.:|||.:       ..|.
Zfish   454 RELFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAG--------TSILFGVLIEAIGIAWFYGV 510

  Fly   980 PYNGDDLVNDL--------RLCGSMSAFLALSWNVLLPIGLITLSVVDYKASLSNQFYYWRGKSY 1036
            ....||:...:        |||          |..:.|..|:.:.||.: |:.:...|   |..|
Zfish   511 DRFSDDIEEMIGQRPGLYWRLC----------WKFVSPCFLLFMVVVSF-ATFNPPKY---GSYY 561

  Fly  1037 FTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPPEEGEEPRRPSARQ 1099
            |..|:..:|..:.|..::::|:.|   .|::.:. |....:::.....|..:.....|...||
Zfish   562 FPTWATMVGWCLSISSMIMVPLYA---FYKFCSL-PGSFCDKLAYAITPETDHHLVERGEVRQ 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 135/529 (26%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 164/679 (24%)

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