DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and slc6a13

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:688 Identity:151/688 - (21%)
Similarity:259/688 - (37%) Gaps:172/688 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   474 TTPL---EPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQ 534
            |.||   ||..:...::.|:    .||.:.....|::.|..:|:.|:.||..|.. |.||.|.:.
 Frog    18 TKPLMEKEPKMEDGDMMIER----GQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIP 78

  Fly   535 FLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW-KISPICAGVGIALVMQQCFLALYSTVSLAWILV 598
            :|:.....|||:.:|:..||.....|.|:.| ||.|:..|:|.:..:....|..|..|.|||.|.
 Frog    79 YLIFLFTCGIPVFFLETALGQYTSQGGVTAWRKICPLFEGIGYSSQVIVMLLNCYYIVVLAWALF 143

  Fly   599 YLRDVFPTA---ARSGYRWQE---MAFPYRYDASNATGNLTQTVAEYFNVVVLQRLHLANHPD-A 656
            ||.:.|.:.   |..|:.|..   :.|.......|.|.|.|.:|.|::...||:   :::..| .
 Frog   144 YLFNSFTSELPWASCGHSWNTENCLDFYKGNSTHNVTLNGTSSVIEFWERRVLR---ISDGIDNI 205

  Fly   657 SGIRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAK---------- 711
            .|:.:     :||..|.|.|...:..:.||:||.||:.|...|.|.:.|.|:..:          
 Frog   206 GGLHW-----ELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVLLIRGVSLPGALTG 265

  Fly   712 --FVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAAL 774
              |....|.||:|             :...|..|..:.|.::.:....:.|:.|.:..|.|   .
 Frog   266 IQFYLYPDLSRLQ-------------DPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNN---C 314

  Fly   775 RRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYP 839
            .||.:                |||    ....|..:|.|        .:|:|:            
 Frog   315 YRDCV----------------ALC----FLNSGTSFVAG--------FAIFSI------------ 339

  Fly   840 RSLIPHYSSFIGETYRRNRTMIHV----ESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATF 900
                   ..|:.|     ...:|:    ||| ..|.||:  :|..:|:.  ..|.:||...|...
 Frog   340 -------LGFMAE-----EQGVHISDVAESG-PGLAFIA--YPRAVSMM--PFSPLWACFFFFMV 387

  Fly   901 AGFGLAQLCVMWKPISSALGNSTSSV---------------LLSCVTGLLLSIPFATEMGISILY 950
            ...||....|..:.:.:|:.:...::               ::|.:.||::    .||.|:.:..
 Frog   388 ILLGLDSQFVCVESLVTAVVDMYPTIFRKKNRRELLILGVSMISFLVGLIM----LTEGGMYVFQ 448

  Fly   951 YVDFLLGGSW---FIPIIWTAQIFGVFLIRGRPYNGDDLVNDL-RLCG-SMSAFLALSWNVLLP- 1009
            ..|:......   |:.|..|       |..|..|..|:..:.: .:.| ..:..:...|..:.| 
 Frog   449 LFDYYAASGMCLLFVAIFET-------LCVGWVYGADNFYDKVEHMIGYRPTGIIKYCWLFVTPA 506

  Fly  1010 --IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPV----------TAII 1062
              :.....|:|.|.....|:.|      .:.:|...:|.|:.:..::.||:          .:::
 Frog   507 VCMATFLFSLVKYTPLTYNKHY------VYPWWGDAIGWLLALSSMVCIPLWVGYKLSTIKGSLM 565

  Fly  1063 QIYRYLAHGPPDILERIQLLYRPPEEGEEPRRPSARQT 1100
            :.:|.|....||:.::.|.         ||...:|:.|
 Frog   566 ERFRQLTFPDPDLPQKTQC---------EPLSQTAQGT 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 117/517 (23%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:382020 140/643 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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