DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and SLC6A1

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_003033.3 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens


Alignment Length:654 Identity:156/654 - (23%)
Similarity:268/654 - (40%) Gaps:168/654 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 LALIGCTLGVFNMCRFAVLT-INFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKIS 568
            ::.:|..:|:.|:.||..|. .|.||.||:.:.|..:..|:||..|:..||.....|.:.:||::
Human    55 MSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLA 119

  Fly   569 PICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRYDA--SN---- 627
            |:..|||:|..:...:|.:|..|.::|.:.||.:.|.|.    ..|::...|:..|.  ||    
Human   120 PMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTT----LPWKQCDNPWNTDRCFSNYSMV 180

  Fly   628 ATGNLTQTVAEYFNVVVLQRLH-LANHPDASG-IRFHVNDRQLAFYLALIWAAVFLILCKGLKSL 690
            .|.|:|..|.|::.    :.:| :.:..|..| ||:     .||..||:.|..|:..:.||:...
Human   181 NTTNMTSAVVEFWE----RNMHQMTDGLDKPGQIRW-----PLAITLAIAWILVYFCIWKGVGWT 236

  Fly   691 GKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNI--FAASDFDDFLVNSNSWTAATQETFLTWGL 753
            ||:.|...|.|.:.|.::.  |..|..|...:.|  :...:|.. |.:|..|..|..:.|.::||
Human   237 GKVVYFSATYPYIMLIILF--FRGVTLPGAKEGILFYITPNFRK-LSDSEVWLDAATQIFFSYGL 298

  Fly   754 LGASVIAITSRS--HTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFE 816
            ...|:||:.|.:  |.|     :.||:|:                :||..               
Human   299 GLGSLIALGSYNSFHNN-----VYRDSII----------------VCCIN--------------- 327

  Fly   817 NPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFISEIFP-AV 880
              .| ||:::      .:::......:.|.:         .|::..|.:....|.|::  :| ||
Human   328 --SC-TSMFA------GFVIFSIVGFMAHVT---------KRSIADVAASGPGLAFLA--YPEAV 372

  Fly   881 LSLASDSISWVWAAVAFATFAGFGL-AQLCVMWKPISSALGNSTSSVLLS---------CVTGLL 935
            ..|   .||.:||.:.|:.....|: :|.|.: :...:||.:....:|.:         |:...|
Human   373 TQL---PISPLWAILFFSMLLMLGIDSQFCTV-EGFITALVDEYPRLLRNRRELFIAAVCIISYL 433

  Fly   936 LSIPFATEMGI--------------SILYYVDF-LLGGSWFIPIIWTAQIFGVFLIRGRPYNGDD 985
            :.:...|:.||              |:|:.|.| .:..|||         :||    .|.|:   
Human   434 IGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWF---------YGV----NRFYD--- 482

  Fly   986 LVNDLRLCGSMSA-FLALSWNVLLPI---GLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGS 1046
              |...:.||... :..|.|:...||   |:...|.|....       ...|...|..|.:.:|.
Human   483 --NIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTP-------LTMGNYVFPKWGQGVGW 538

  Fly  1047 LIQIGVLLVIPVTAIIQIYRYLAH------GPPDILERIQLLYRP------PEEGEEPRRPSARQ 1099
            |:.:..:::||        .|:|:      |  .:.:|||::.:|      ||.|  |.:|.|..
Human   539 LMALSSMVLIP--------GYMAYMFLTLKG--SLKQRIQVMVQPSEDIVRPENG--PEQPQAGS 591

  Fly  1100 TASQ 1103
            :.|:
Human   592 STSK 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 123/509 (24%)
SLC6A1NP_003033.3 SLC6sbd_GAT1 2..599 CDD:212075 156/654 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 7/21 (33%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.

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