DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and slc6a8

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:700 Identity:149/700 - (21%)
Similarity:262/700 - (37%) Gaps:185/700 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 PSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLAL 507
            |..:::...|:.|..:|..|.:.|                              |.......::.
Zfish    43 PMSAATGAISAVEKKREGYPERET------------------------------WTRQMDFIMSC 77

  Fly   508 IGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPIC 571
            :|..:|:.|:.||..|.. |.||.||:.::|...:.|||:.:|::.||..::||.:::|.|:|:.
Zfish    78 VGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLFIFLGGIPIFFLEIALGQFMKAGSINVWNIAPLF 142

  Fly   572 AGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPY----------RYDAS 626
            .|:|.|.::...|...|..:.|||...|    |..:..:...|.....|:          :.|..
Zfish   143 KGLGYASMVIVFFCNTYYIMVLAWGFYY----FIKSFNATLPWSTCDNPWNTENCIEIFRQGDCK 203

  Fly   627 NAT------GNLT--------QTVAEYFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALIWA 677
            |.|      ||||        ..:.|::...||......:.|.|      || .:|...|..:|.
Zfish   204 NGTIGNSTFGNLTCEELANGRSPIIEFWENKVLNISDGLDEPGA------VN-WELMLCLLAVWV 261

  Fly   678 AVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAK----------FVYVVDPSRIQNIFAASDFDD 732
            .|:..:.||:||.||:.|...|.|.|.|.::..:          .:|.|.|.             
Zfish   262 MVYFCVWKGVKSTGKIVYFTATFPYVVLIILLVRGVTLPGAYDGILYYVKPD------------- 313

  Fly   733 FLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFT-LIGLGLMALLA 796
                              |..||.:.:.|               ||...:.|: .||||  ||.|
Zfish   314 ------------------WSKLGEAQVWI---------------DAGTQIFFSYAIGLG--ALTA 343

  Fly   797 LCCAQILWQHGYVYVPGSFE--NPDCYTSIYSL---QSNTNPYLLSYPRSLIPHYSSFIGETYRR 856
            |               ||:.  |.|||...:.|   .|.|:.:......|::...:|..|....:
Zfish   344 L---------------GSYNRFNNDCYKDAFVLALINSGTSFFAGFVVFSILGFMASEQGVDISK 393

  Fly   857 NRTMIHVESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGL-AQLCVMWKPISSALG 920
                 ..||| ..|.||:  :|..:|:.  .::.||||:.|......|| :|...:...::..|.
Zfish   394 -----VAESG-PGLAFIA--YPKAVSMM--PVAPVWAALFFIMLLLLGLDSQFVGVEGFVTGILD 448

  Fly   921 ----------NSTSSVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFL 975
                      ....:|.:.|:...::.:...|:.|:.:....|:.....  :.::|  |.|...:
Zfish   449 LFPGKYYMRYQREIAVAICCLLCFIIDLSMVTQGGMYVFQLFDYYSASG--MTLLW--QAFWECV 509

  Fly   976 IRGRPYNGDDLVNDL-RLCGSMS-AFLALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKS 1035
            :....|..|..::|: |:.|... .::...|:::.|   :|:....:::||....|..|      
Zfish   510 VVAWVYGADRFMDDIARMIGYRPFPWMKWCWSIITPCVCMGIFLFHLLNYKPLTYNNVY------ 568

  Fly  1036 YFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRP 1085
            .:.:|...:|..:.:..:|.|||:.:.:    |:.......||.:.|.:|
Zfish   569 VYPWWGEVIGWCLALSSMLCIPVSLVYK----LSGAKGTFKERWENLTKP 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 119/526 (23%)
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 143/678 (21%)

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