DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a12

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:670 Identity:150/670 - (22%)
Similarity:251/670 - (37%) Gaps:169/670 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 QWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRA 559
            ||.:.....|::.|..:|:.|:.||..|.. |.||.|.:.:.:.....|||:.:|::.||.....
  Rat    52 QWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYSSQ 116

  Fly   560 GPVSMW-KISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFP-----TAARSGYRWQEMA 618
            |.|:.| ||.|:..|:|:|.|:.:.:|.:|..:.|||.|.||...|.     |...:.:..:...
  Rat   117 GSVTAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNTEHCV 181

  Fly   619 FPYRYDASNATG---NLTQTVAEYFNVVVL---QRLHLANHPDASGIRFHVNDRQLAFYLALIWA 677
            ....|.::.|..   |.|..|.|::...||   ..:|     |...:|:     :||..|.|.|.
  Rat   182 DFLNYSSTRAASYSENFTSPVMEFWERRVLGITSGIH-----DLGSLRW-----ELALCLLLAWI 236

  Fly   678 AVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAK----------FVYVVDPSRIQNIFAASDFDD 732
            ..:..:.||:||.||:.|...|.|.:.|.::..:          .|:.:.|..::          
  Rat   237 ICYFCIWKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYLKPDLLR---------- 291

  Fly   733 FLVNSNSWTAATQETFLTWGLLGASVIAITS--RSHTNANKAALRRDAILL-------------V 782
             |.:...|..|..:.|.::.:....:.|:.|  :.|.|.     .||:|.|             |
  Rat   292 -LKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNC-----YRDSIALCFLNSATSFVAGFV 350

  Fly   783 LFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYS 847
            :|::  ||.||          .:.|   ||                                   
  Rat   351 VFSI--LGFMA----------QEQG---VP----------------------------------- 365

  Fly   848 SFIGETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGL-AQLCVM 911
              |.|.         .||| ..|.||:  ||..:::.  .:|.:|:.:.|......|| :|...|
  Rat   366 --ISEV---------AESG-PGLAFIA--FPKAVTMM--PLSQLWSCLFFLMLLFLGLDSQFVCM 414

  Fly   912 WKPISSAL----------GNSTSSVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIW 966
            ...:::::          |.....:|...:...|:.:...||.|:.|....|:.....  |.:::
  Rat   415 ECLVTASMDMFPQQLRKRGRRELLILAVAIVCYLMGLLLVTEGGMYIFQLFDYYASSG--ICLLF 477

  Fly   967 TAQIFGVFLIRGRPYNGD---DLVNDLRLCGSMS-AFLALSWNVLLP---IGLITLSVVDYKASL 1024
            .: :|.|..| |..|..|   |.|.|  :.|... ..:.:||..|.|   :.....|:..|....
  Rat   478 LS-LFEVICI-GWVYGADRFYDNVED--MIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLK 538

  Fly  1025 SNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRP---- 1085
            .|..|      .:..|...:|.|:....:..:|:..||.:.:  ..|  ...:|:|.|..|    
  Rat   539 YNNVY------IYPSWGYSIGWLLAFSSMACVPLFIIITLLK--TQG--SFKKRLQRLITPDPSL 593

  Fly  1086 PEEG-EEPRRPSARQTASQS 1104
            |:.| ..|:..|:.|..|.|
  Rat   594 PQPGRRSPQDGSSAQNCSTS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 114/523 (22%)
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:294310 142/644 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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