DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and slc6a1b

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:643 Identity:143/643 - (22%)
Similarity:258/643 - (40%) Gaps:155/643 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 LALIGCTLGVFNMCRFAVLT-INFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKIS 568
            |:.:|..:|:.|:.||..|. .|.||.||:.:.|..:..|:||.:|:..||.....|.:.:||::
Zfish    54 LSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALGQYTSIGGLGVWKLA 118

  Fly   569 PICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRYDA--SNAT-- 629
            |:..|||:|..:...:|.:|..|.:||.:.||.:.|.|    ...|:....|:..|.  ||.:  
Zfish   119 PMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTT----DLPWKSCDNPWNTDKCFSNYSMA 179

  Fly   630 --GNLTQTVAEYFNVVVLQRLH-LANHPDASG-IRFHVNDRQLAFYLALIWAAVFLILCKGLKSL 690
              ||:|..|.|::.    :.:| |.:..:..| ||.     .||..||:.|..|:..:.||:...
Zfish   180 NIGNMTSAVVEFWE----RNMHQLTDGLEKPGEIRL-----PLAITLAIAWVLVYFCIWKGVGWT 235

  Fly   691 GKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNI--FAASDFDDFLVNSNSWTAATQETFLTWGL 753
            ||:.|...|.|...|.::..:.|.:  |...:.|  :...:|.. |..|..|..|..:.|.::||
Zfish   236 GKVVYFSATYPYFMLFILFIRGVTL--PGAKEGILFYVTPEFSK-LKESEVWLDAATQIFFSYGL 297

  Fly   754 LGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENP 818
            ...|:||:.|.:..|.|   :.:|:|:                :||.                  
Zfish   298 GLGSLIALGSYNPFNNN---VYKDSII----------------VCCI------------------ 325

  Fly   819 DCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFISEIFP-AVLS 882
            :.:||:::      .:::......:.|.:         .|.:..|.:....|.|::  :| ||..
Zfish   326 NSFTSMFA------GFVIFSIVGFMAHIT---------KRPIADVAASGPGLAFLA--YPEAVTQ 373

  Fly   883 LASDSISWVWAAVAFATFAGFGL-AQLCVMWKPISSAL--------GNSTSSVLLSCVTGLLLSI 938
            |   .||.:||.:.|:.....|: :|.|.:...|::.:        |.....:.:.|:...|:.:
Zfish   374 L---PISPLWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFPRALRGRREIFIAVVCLVSYLIGL 435

  Fly   939 PFATEMGISILYYVDFLLGG---------------SWFIPIIWTAQIFGVFLIRGRPYNGDDLVN 988
            ...|:.|:.:....|:....               |||         :||....|   |.::::.
Zfish   436 SNITQGGLYVFKLFDYYSASGMCLLFLVFFECVSISWF---------YGVNKFYG---NLEEMIG 488

  Fly   989 DLRLCGSMSAFLALSWNVLLPI---GLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQI 1050
             .:.|    .:..|.|.|..|:   |:...|.|.......|.:       .|..|.:.:|..:.:
Zfish   489 -YKPC----IWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNY-------VFPKWGQGVGWCMAL 541

  Fly  1051 GVLLVIPVTAIIQIYRYLA-HGPPDILERIQLLYRP-----------PEEGEEPRRPS 1096
            ..:::||.   ...|.:|. .|  ...||::::.:|           ||  ::|..|:
Zfish   542 SSMVLIPG---YMGYMFLTLKG--SYKERLRIMIQPTAAAVRTQENGPE--QQPENPT 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 117/506 (23%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 143/643 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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