DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and CG4476

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:654 Identity:140/654 - (21%)
Similarity:242/654 - (37%) Gaps:162/654 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 PVQTTTMCSASSTTPLEP------LHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRF 520
            |...|:.|:.|....|:|      |...:|....|...|  |..:....::.|..::|:.|:.||
  Fly    15 PKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDN--WGSSLEFLMSCIALSVGLGNVWRF 77

  Fly   521 AVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIALVMQQCF 584
            ....: |.||.||:.:|::..:.|.|:.:::|.||.....|.|.::..:|:..|||.|.::....
  Fly    78 PFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGV 142

  Fly   585 LALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRYDASNATG----------NLTQTVAEY 639
            ||.|....:|..|.|..|.|    .|...|......:.....:|:|          |.:.:...|
  Fly   143 LATYYASVMALTLRYFFDSF----ASELPWSFCREEWGDGCVSASGGQPLQGQLSRNFSSSTQLY 203

  Fly   640 FNVVVLQRLHLANHPDA--SGIRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPL 702
            ...:||      |..|:  .||.:  ....||..|.:.|..|.||:.:|:||.||.||::...|.
  Fly   204 LQRIVL------NETDSLEEGIGY--PSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPY 260

  Fly   703 VALAVVTAKFVYVVDPSRIQNI--FAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRS 765
            |.:.::..:.:.:  |.....:  |....::. |:....|..|..:.|.:..:....:|..:|.:
  Fly   261 VVMFILLVRALTL--PGAYDGVMYFLTPQWEK-LLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYN 322

  Fly   766 HTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTS------I 824
            ....|   :.|||.::.  ||                                |.:||      |
  Fly   323 RFGHN---VYRDANIVT--TL--------------------------------DTFTSLLSGVII 350

  Fly   825 YSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFIS--------EIFPAVL 881
            :.:..|            :.|.|.        .:.:..|......|.|||        ::||.|.
  Fly   351 FGILGN------------LAHESG--------TKDIASVVKAGPGLAFISYPDAIAKFKMFPQVF 395

  Fly   882 SLASDSISWVWAAVAFATFAGFGLAQL-CVMWKPISSALGNSTSSVLL------SCVTGLLLSIP 939
            ||       ::.|:.|....|..:..: |:|     :.|.:...:|.|      ..|.|.|:.:.
  Fly   396 SL-------LFFAMLFMLGVGSNVGMVSCIM-----TVLKDQFVNVKLWIIVVSLSVIGFLVGLI 448

  Fly   940 FATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVNDLR--LCGSMSAFLAL 1002
            :.|..|..|:..:||  .|..|:.::  :.||.:..: |..|....|..|..  |....|.:..:
  Fly   449 YITPGGQHIITLMDF--HGVTFVSLV--SAIFELIAV-GWIYGTKRLCQDAEYMLNIKTSNYYRI 508

  Fly  1003 SWNVLLPI--------GLITLSVVDYKAS----------------LSNQFYYWRGKSYFTYWSRK 1043
            .|:::.|:        .|:|:..:.|...                :..|.:||.|.:.|   .:.
  Fly   509 CWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANF---KQP 570

  Fly  1044 MGSL 1047
            .|||
  Fly   571 KGSL 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 110/510 (22%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 120/564 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.