DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and SerT

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster


Alignment Length:742 Identity:158/742 - (21%)
Similarity:289/742 - (38%) Gaps:147/742 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 SSARSSRMPSPVSLPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPL-----HQLQLLLR 488
            ::.||:  |:|.|...:|.::...|.|.|.:    .||   .|..|.||.|.     ..|.:.:.
  Fly    15 TTGRSN--PAPWSDDKESPNNEDDSNEDDGD----HTT---PAKVTDPLAPKLANNERILVVSVT 70

  Fly   489 EKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMC 552
            |:.  ...|.......||:||..:.:.|:.||..:.. |.||.||:.:.|..:..|:||.::::.
  Fly    71 ERT--RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELA 133

  Fly   553 LGAKIRAGPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQE 616
            ||...|.|.:|:|| |.|...|||.|:.:...::.:|....:.|.:.||...|    .|...|..
  Fly   134 LGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASF----TSKLPWTS 194

  Fly   617 MAFPYRYD------ASNATGNLTQTVAEYFNVVVLQRLHLANHPDASG-IRFHVNDRQLAFYLAL 674
            ...|:..:      :.|.|...|....|:|...||:. :..|..|..| ::     ..||..:..
  Fly   195 CDNPWNTENCMQVTSENFTELATSPAKEFFERKVLES-YKGNGLDFMGPVK-----PTLALCVFG 253

  Fly   675 IWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSNS 739
            ::..|:..|.||::|.||:.::....|.|.|.::..:.|.:.........:...::.. |.||..
  Fly   254 VFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHK-LKNSKV 317

  Fly   740 WTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILW 804
            |..|..:.|.:.|....:::|::|.:..|.|   ..|||::.                       
  Fly   318 WIDAASQIFFSLGPGFGTLLALSSYNKFNNN---CYRDALIT----------------------- 356

  Fly   805 QHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQA 869
                       .:.:|.||          :|..:....:..|.:::      .:|.|. :.|.:.
  Fly   357 -----------SSINCLTS----------FLAGFVIFSVLGYMAYV------QKTSID-KVGLEG 393

  Fly   870 LRFISEIFPAVLSLASDSISWVWAAVAF---------ATFAGFGLAQLCVMWKPISSALGNSTS- 924
            ...:..::|..::..|.|:  .|:.:.|         :||.|.. |.:..:.......:|.... 
  Fly   394 PGLVFIVYPEAIATMSGSV--FWSIIFFLMLITLGLDSTFGGLE-AMITALCDEYPRVIGRRREL 455

  Fly   925 SVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVND 989
            .|||......|.::|..|..|:.::.::: :.|....|..:...:..|||..    |..|...:|
  Fly   456 FVLLLLAFIFLCALPTMTYGGVVLVNFLN-VYGPGLAILFVVFVEAAGVFWF----YGVDRFSSD 515

  Fly   990 L-RLCGSM-SAFLALSWNVLLPIGLITL---SVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQ 1049
            : ::.||. ..|..:.|..:.|:.|:|:   |::.||..|..::||       ..||.::|..:.
  Fly   516 VEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYY-------PDWSYQVGWAVT 573

  Fly  1050 IGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPP---------EEGEEPRRPSARQTAS--- 1102
            ...:|.||:..   ||::.........:|:|..::|.         ::|.......|:...:   
  Fly   574 CSSVLCIPMYI---IYKFFFASKGGCRQRLQESFQPEDNCGSVVPGQQGTSVXHDHAQVHVNIRT 635

  Fly  1103 ------------QSRRNALGQTTEGGQ 1117
                        .|..|:|..||.|.:
  Fly   636 SCTSIKIYNLNCSSNSNSLSPTTSGAE 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 104/493 (21%)
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 131/615 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.