DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and SerT

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster


Alignment Length:742 Identity:158/742 - (21%)
Similarity:289/742 - (38%) Gaps:147/742 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 SSARSSRMPSPVSLPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPL-----HQLQLLLR 488
            ::.||:  |:|.|...:|.::...|.|.|.:    .||   .|..|.||.|.     ..|.:.:.
  Fly    15 TTGRSN--PAPWSDDKESPNNEDDSNEDDGD----HTT---PAKVTDPLAPKLANNERILVVSVT 70

  Fly   489 EKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMC 552
            |:.  ...|.......||:||..:.:.|:.||..:.. |.||.||:.:.|..:..|:||.::::.
  Fly    71 ERT--RETWGQKAEFLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELA 133

  Fly   553 LGAKIRAGPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQE 616
            ||...|.|.:|:|| |.|...|||.|:.:...::.:|....:.|.:.||...|    .|...|..
  Fly   134 LGQFHRCGCLSIWKRICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASF----TSKLPWTS 194

  Fly   617 MAFPYRYD------ASNATGNLTQTVAEYFNVVVLQRLHLANHPDASG-IRFHVNDRQLAFYLAL 674
            ...|:..:      :.|.|...|....|:|...||:. :..|..|..| ::     ..||..:..
  Fly   195 CDNPWNTENCMQVTSENFTELATSPAKEFFERKVLES-YKGNGLDFMGPVK-----PTLALCVFG 253

  Fly   675 IWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSNS 739
            ::..|:..|.||::|.||:.::....|.|.|.::..:.|.:.........:...::.. |.||..
  Fly   254 VFVLVYFSLWKGVRSAGKVVWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHK-LKNSKV 317

  Fly   740 WTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILW 804
            |..|..:.|.:.|....:::|::|.:..|.|   ..|||::.                       
  Fly   318 WIDAASQIFFSLGPGFGTLLALSSYNKFNNN---CYRDALIT----------------------- 356

  Fly   805 QHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQA 869
                       .:.:|.||          :|..:....:..|.:::      .:|.|. :.|.:.
  Fly   357 -----------SSINCLTS----------FLAGFVIFSVLGYMAYV------QKTSID-KVGLEG 393

  Fly   870 LRFISEIFPAVLSLASDSISWVWAAVAF---------ATFAGFGLAQLCVMWKPISSALGNSTS- 924
            ...:..::|..::..|.|:  .|:.:.|         :||.|.. |.:..:.......:|.... 
  Fly   394 PGLVFIVYPEAIATMSGSV--FWSIIFFLMLITLGLDSTFGGLE-AMITALCDEYPRVIGRRREL 455

  Fly   925 SVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVND 989
            .|||......|.::|..|..|:.::.::: :.|....|..:...:..|||..    |..|...:|
  Fly   456 FVLLLLAFIFLCALPTMTYGGVVLVNFLN-VYGPGLAILFVVFVEAAGVFWF----YGVDRFSSD 515

  Fly   990 L-RLCGSM-SAFLALSWNVLLPIGLITL---SVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQ 1049
            : ::.||. ..|..:.|..:.|:.|:|:   |::.||..|..::||       ..||.::|..:.
  Fly   516 VEQMLGSKPGLFWRICWTYISPVFLLTIFIFSIMGYKEMLGEEYYY-------PDWSYQVGWAVT 573

  Fly  1050 IGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPP---------EEGEEPRRPSARQTAS--- 1102
            ...:|.||:..   ||::.........:|:|..::|.         ::|.......|:...:   
  Fly   574 CSSVLCIPMYI---IYKFFFASKGGCRQRLQESFQPEDNCGSVVPGQQGTSVXHDHAQVHVNIRT 635

  Fly  1103 ------------QSRRNALGQTTEGGQ 1117
                        .|..|:|..||.|.:
  Fly   636 SCTSIKIYNLNCSSNSNSLSPTTSGAE 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 104/493 (21%)
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 131/615 (21%)

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