DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and Slc6a14

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_038955501.1 Gene:Slc6a14 / 298340 RGDID:1561810 Length:646 Species:Rattus norvegicus


Alignment Length:658 Identity:150/658 - (22%)
Similarity:261/658 - (39%) Gaps:165/658 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 WPHAGSRTLALIGCTLGVFNMCRFAVLT-INFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAG 560
            |.......|:::|..:|:.|:.||..|| .|.||.||:.:.::..:.|:||.:|:..||.....|
  Rat    45 WSKKSDYLLSMVGYAVGLGNVWRFPYLTYTNGGGAFLIPYAIMLALAGLPLFFLECSLGQFASLG 109

  Fly   561 PVSMWKISPICAGVGIALVMQQCFLALYSTVSLAWILVYL----RDVFPTAARSGYRWQEMAFPY 621
            |||:|:|.|:..||||.:|:...|:.:|..|.:|:.|.||    :.|.|        |...:..:
  Rat   110 PVSVWRILPLFQGVGITMVLISIFVTIYYNVIIAYSLYYLFASFQSVLP--------WANCSSSW 166

  Fly   622 RYD-------------ASNATGNLTQTVA------------------------EYFNVVVLQRLH 649
            ..|             :::..|::...::                        :|::.|.|:|  
  Rat   167 ADDNCSRQPIVTGCRVSTDTGGDMFMNISWVNSNNFTCLNGSEVFRPGQLPSEQYWDKVTLRR-- 229

  Fly   650 LANHPDASGIRFHVNDRQLAFYLA----LIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTA 710
             ::..|.:|:        :.:|||    |.|..|...|.||:||.||:.|.....|.|.|.::..
  Rat   230 -SSGMDETGV--------IVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTALFPYVVLLILLI 285

  Fly   711 KFVYVVDPSR--IQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAA 773
            :...:...|:  ...|.|.|:|.. |..:..|..|..:.|.:..:....::|::|.:..|.|   
  Rat   286 RGATLEGASKGISYYIGAQSNFTK-LREAEVWKDAATQIFYSLSVAWGGLVALSSYNKFNNN--- 346

  Fly   774 LRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSY 838
            ...|||::.|                                  .:|.||:::      .:.:. 
  Rat   347 CYSDAIIVCL----------------------------------TNCLTSVFA------GFAIF- 370

  Fly   839 PRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGF 903
              |::.|.:...|:...:     .|:|||. |.||:  :|..|:......  .|:.:.|......
  Rat   371 --SILGHMAHISGKEVSQ-----VVKSGFD-LAFIA--YPEALAQLPGGP--FWSILFFFMLLTL 423

  Fly   904 GLAQLCVMWKPISS--------ALGNSTSSVLLSCVTGL-LLSIPFATEMGISILYYVDFLLGGS 959
            ||.......:.|::        |:......:.|.|...| ||.:...|:.||..::.:|....| 
  Rat   424 GLDSQFASIETITTTIQDLFPKAMKRMRVPITLGCCLILFLLGLVCVTQAGIYWVHLIDHFCAG- 487

  Fly   960 WFIPIIWTAQIFGVFLIRGRPYNGDDLVNDLRLCGSMSAFL-----ALSWNVLLPI---GLITLS 1016
            |.|.|....:|.|:..|    |.|:..:.|:.:......:|     ...|.|:.||   .::..|
  Rat   488 WGILIAAILEIAGIIWI----YGGNRFIEDIEMMIGAKRWLFWLWWRACWFVITPILLSAILVWS 548

  Fly  1017 VVDYKASLSNQFYYWRGKSY----FTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILE 1077
            :|.:           ...:|    :..|...:|..:.|..::.||:.|||:|.|  |.|  :||:
  Rat   549 LVKF-----------HRPNYADIPYPDWGVALGWCMIIFCIIWIPIMAIIKIVR--AEG--NILQ 598

  Fly  1078 RIQLLYRP 1085
            ||....||
  Rat   599 RIIKCCRP 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 119/531 (22%)
Slc6a14XP_038955501.1 SLC6sbd_ATB0 42..645 CDD:271391 150/658 (23%)

Return to query results.
Submit another query.