DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a6

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_008761345.1 Gene:Slc6a6 / 29464 RGDID:61912 Length:631 Species:Rattus norvegicus


Alignment Length:753 Identity:160/753 - (21%)
Similarity:261/753 - (34%) Gaps:231/753 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 TPTHP---IMSTCSELSSARSSRMPSPVSLPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPL 477
            ||.||   .|:|..:|...:.  ....:..||...|.| :..|.:.:..|.|             
  Rat     2 TPVHPENEEMATKEKLQCLKD--FHKDILKPSPGKSPG-TRPEDEADGKPPQ------------- 50

  Fly   478 EPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVI 541
                      |||      |.......|::.|..:|:.|:.||..|.. |.||.||:.:.:....
  Rat    51 ----------REK------WSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFG 99

  Fly   542 FGIPLLWLQMCLGAKIRAGPVSMW-KISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFP 605
            .|:|:.:|::.:|.....|.::.| ||.|:.:|:|.|.::....|.:|..|.|||...||...|.
  Rat   100 SGLPVFFLEVIIGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFQSFQ 164

  Fly   606 TA---ARSGYRW---QEMAFPYRYDASN----ATGNLTQTVAEYFNVVVLQRLHLANHPDASGIR 660
            ..   |...:.|   |.|....|.:.|:    :..|.|..|.|::...||......:||  ..::
  Rat   165 KDLPWAHCNHSWNTPQCMEDTLRRNESHWVSLSAANFTSPVIEFWERNVLSLSSGIDHP--GSLK 227

  Fly   661 FHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTA------------KFV 713
            :     .||..|.|:|...|..:.||::|.||:.|...|.|...|.|:..            ||.
  Rat   228 W-----DLALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGEGIKFY 287

  Fly   714 YVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGL-LGASVIAITSRSHTNANKAALRRD 777
            ...:.||::             :...|..|..:.|.::.: ||    |:||....|..|....||
  Rat   288 LYPNISRLE-------------DPQVWIDAGTQIFFSYAICLG----AMTSLGSYNKYKYNSYRD 335

  Fly   778 AILLVLFT-----LIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLS 837
            .:||....     :.|..:.::|           |::......:..|.      .:|......::
  Rat   336 CMLLGCLNSGTSFVSGFAIFSIL-----------GFMAQEQGVDIADV------AESGPGLAFIA 383

  Fly   838 YPR------------------------------------SLIPHYSSFIGETYRRNRTMIHVESG 866
            ||:                                    ||:..|.||:.:.|||          
  Rat   384 YPKAVTMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRR---------- 438

  Fly   867 FQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSVLLSCV 931
                    |||.|::                                                |.
  Rat   439 --------EIFIAIV------------------------------------------------CS 447

  Fly   932 TGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVNDLR-LCG- 994
            ...||.:...||.|:.:....|:.....  :.::|.| .|..|:| ...|.||:|.:.:. :.| 
  Rat   448 ISYLLGLTMVTEGGMYVFQLFDYYAASG--VCLLWVA-FFECFVI-AWIYGGDNLYDGIEDMIGY 508

  Fly   995 SMSAFLALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVI 1056
            ....::..||.|:.|   :|....|:|.|.....|:.|      .:..|:..:|..:.:..::.|
  Rat   509 RPGPWMKYSWAVITPALCVGCFIFSLVKYVPLTYNKVY------RYPDWAIGLGWGLALSSMVCI 567

  Fly  1057 PVTAIIQIYRYLAHGPPDILERIQLLYRPPEEGEEPRR 1094
            |:..:|.:.|  ..||  :..||:.|..|    .||.|
  Rat   568 PLVIVILLCR--TEGP--LRVRIKYLITP----REPNR 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 111/540 (21%)
Slc6a6XP_008761345.1 SLC5-6-like_sbd 51..592 CDD:382020 142/667 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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