DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a18

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_063141398.1 Gene:Slc6a18 / 29323 RGDID:69352 Length:642 Species:Rattus norvegicus


Alignment Length:727 Identity:148/727 - (20%)
Similarity:241/727 - (33%) Gaps:233/727 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 MCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTINFGGN-F 531
            |..||...||..:...:          .:|.:.....|:.||..:|:.|:.||..|....||. |
  Rat     1 MAQASGMDPLVDIEDER----------PKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAF 55

  Fly   532 LLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAW 595
            |:.:.:..|..||||.::::.:|.::|.|.:.:|| |||...|||:........::||....|.|
  Rat    56 LIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLW 120

  Fly   596 ILVYLRDVF----PTAA------RSG------------YRWQEMAFPYRYDASNATGNLTQTVAE 638
            :|.:..:.|    |.:.      |:|            |.|.........|.|| ||.:      
  Rat   121 VLWFFLNSFQHPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISN-TGTI------ 178

  Fly   639 YFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALI--WAAVFLILCKGLKSLGKLAYIIYTLP 701
                                        |...:|.|:  |..|:|.:.:|::|.||:.|.....|
  Rat   179 ----------------------------QWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFP 215

  Fly   702 LVALAV----------VTAKFVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGA 756
            .:.|.:          .|....|:..|:.           ..|.|...|..|..:.|.:..|...
  Rat   216 YLVLTIFLIRGLTLPGATEGLTYLFTPNM-----------KILQNPRVWLDAATQIFFSLSLAFG 269

  Fly   757 SVIAITSRSHTNANKAALRRDAILLVL-------------FTLIGLGLMALLALCCAQILWQHGY 808
            ..||..|.:....|   ..:||:.:.|             |:::|.........|..:...:|..
  Rat   270 GHIAFASYNQPRNN---CEKDAVTIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRTFLEHWN 331

  Fly   809 VY------VPGS----------------FENPDCYTSIYSLQSNTNPYLLSYPRSLIP------- 844
            :.      ||.|                |:.|:     .|:..:..|.:|.|..:..|       
  Rat   332 ICWIIEHPVPSSLAFSCSCRNILSLINEFDFPE-----LSISRDEYPSVLMYLNATQPERVARLP 391

  Fly   845 ----HYSSFIGETYRRNRTMIHVESGFQALRFISEIF-PAVLSLASDSISWVWAAVAFATFAGFG 904
                |...|:.::          .|| ..|.||  :| .|||.:...|   ||:.:.|......|
  Rat   392 LKTCHLEDFLDKS----------ASG-PGLAFI--VFTEAVLHMPGAS---VWSVLFFGMLFTLG 440

  Fly   905 LAQLCVMWKPISSALGNSTSSVLLSCVTGLL-LSIPFATEMG----ISILYYVDFLL--GGSW-- 960
            |          ||..||....:......|:| ..:|..|..|    |..|..:.|.|  |..|  
  Rat   441 L----------SSMFGNMEGVITPLFDMGILPKGVPKETMTGVVCFICFLSAICFTLQSGSYWLE 495

  Fly   961 ---------------FIPIIWTAQIFGVFLIRGRPYNGDDLVNDLRLCGSM--------SAFLAL 1002
                           |:.::....::|:                .|.|..:        |.:..:
  Rat   496 IFDSFAASLNLIIFAFMEVVGVIHVYGI----------------KRFCDDIEWMTGRRPSLYWQV 544

  Fly  1003 SWNVLLPIGL--ITLSVVDYKASLSNQFYYW---------RGKSYFTYWSRKMGSLIQIGVLLVI 1056
            :|.|:.|:.|  |.||.:...|..|..:..|         |.:..:..|.:....|:.....|.:
  Rat   545 TWRVVSPMLLFGIFLSYIVLLAQSSPSYKAWNPQYEHFPSREEKLYPGWVQVTCVLLSFLPSLWV 609

  Fly  1057 PVTAIIQ-IYRY 1067
            |..|:.| :::|
  Rat   610 PGIALAQLLFQY 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 121/581 (21%)
Slc6a18XP_063141398.1 None

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