DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a3

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_036826.1 Gene:Slc6a3 / 24898 RGDID:3715 Length:619 Species:Rattus norvegicus


Alignment Length:731 Identity:176/731 - (24%)
Similarity:285/731 - (38%) Gaps:198/731 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 MPSPVSLPSDSSSSGSSSAE--HDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWP 498
            |.|.|:...:|::.|....|  ..:|.:.||.|     :||....|...::...||      .|.
  Rat    11 MSSVVAPAKESNAVGPREVELILVKEQNGVQLT-----NSTLINPPQTPVEAQERE------TWS 64

  Fly   499 HAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPV 562
            ......|::||..:.:.|:.||..|.. |.||.||:.:||..||.|:||.::::.||...|.|..
  Rat    65 KKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAA 129

  Fly   563 SMWKISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRY---- 623
            .:|||.|:..|||..:::...::..:..|.:||.|.|....|           .|..|:.:    
  Rat   130 GVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSF-----------TMDLPWIHCNNT 183

  Fly   624 ---------DASNATGNL-------TQTVAEYFNVVVLQRLHLANHPDASG-IRFHVNDRQLAFY 671
                     .|||::..|       |...||||...|| .||.:...|..| .|:     ||...
  Rat   184 WNSPNCSDAHASNSSDGLGLNDTFGTTPAAEYFERGVL-HLHQSRGIDDLGPPRW-----QLTAC 242

  Fly   672 LALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDF-LV 735
            |.|:...::..|.||:|:.||:.:|..|:|.|.|..:..:.|.:  |..:..|.|....|.: |.
  Rat   243 LVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTL--PGAMDGIRAYLSVDFYRLC 305

  Fly   736 NSNSW-TAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCC 799
            .::.| .||||                                    |.|:| |:|...|:|.  
  Rat   306 EASVWIDAATQ------------------------------------VCFSL-GVGFGVLIAF-- 331

  Fly   800 AQILWQHGYVYVPGSFENPDCY------TSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNR 858
                  ..|    ..|.| :||      |||.||.|.::.:::          .||:|...:::.
  Rat   332 ------SSY----NKFTN-NCYRDAIITTSINSLTSFSSGFVV----------FSFLGYMAQKHN 375

  Fly   859 TMIH-VESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPISSALGNS 922
            ..|. |.:....|.||  |:|.  ::|:..:|..||||.|......|          |.||:|. 
  Rat   376 VPIRDVATDGPGLIFI--IYPE--AIATLPLSSAWAAVFFLMLLTLG----------IDSAMGG- 425

  Fly   923 TSSVLLSCVTGL-----------------------LLSIPFATEMGISILYYVDFLLGGSWFIPI 964
                :.|.:|||                       |||:...|..||.:...:|....|      
  Rat   426 ----MESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFAAG------ 480

  Fly   965 IWTAQIFGVFL-------IRGRPYNGDDLVNDLRLCGSM-SAFLALSWNVLLP---IGLITLSVV 1018
              |:.:|||.:       ..|.....||:   .::.|.. :.:..|.|.::.|   :.::.:|:|
  Rat   481 --TSILFGVLIEAIGVAWFYGVQQFSDDI---KQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIV 540

  Fly  1019 DYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLY 1083
            .::..     :|  |...|..|:..:|.:|....:.::|:.|   .|::.:. |....|::....
  Rat   541 TFRPP-----HY--GAYIFPDWANALGWIIATSSMAMVPIYA---TYKFCSL-PGSFREKLAYAI 594

  Fly  1084 RPPEEGEEPRRPSARQ 1099
            .|.::.:...|...||
  Rat   595 TPEKDHQLVDRGEVRQ 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 136/535 (25%)
Slc6a3NP_036826.1 SLC6sbd_DAT1 60..613 CDD:212083 163/677 (24%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 6/32 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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