DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a1

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:722 Identity:168/722 - (23%)
Similarity:291/722 - (40%) Gaps:187/722 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 LPSDSS--SSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCG---FNSQWPHAG 501
            :.:|:|  :.|..|.|..:.|          .:|..|    ..|.:.:::|.|   ....|....
Mouse     1 MATDNSKVADGQISTEVSEAP----------VASDKP----KTLVVKVQKKAGDLPDRDTWKGRF 51

  Fly   502 SRTLALIGCTLGVFNMCRFAVLT-INFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW 565
            ...::.:|..:|:.|:.||..|. .|.||.||:.:.|..:..|:||..|:..||.....|.:.:|
Mouse    52 DFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVW 116

  Fly   566 KISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRYDA--SN- 627
            |::|:..|||:|..:...:|.:|..|.::|.:.||.:.|.|.    ..|::...|:..|.  || 
Mouse   117 KLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTT----LPWKQCDNPWNTDRCFSNY 177

  Fly   628 ---ATGNLTQTVAEYFNVVVLQRLH-LANHPDASG-IRFHVNDRQLAFYLALIWAAVFLILCKGL 687
               .|.|:|..|.|::.    :.:| :.:..|..| ||:     .||..||:.|..|:..:.||:
Mouse   178 SLVNTTNMTSAVVEFWE----RNMHQMTDGLDKPGQIRW-----PLAITLAIAWVLVYFCIWKGV 233

  Fly   688 KSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNI--FAASDFDDFLVNSNSWTAATQETFLT 750
            ...||:.|...|.|.:.|.::.  |..|..|...:.|  :...:|.. |.:|..|..|..:.|.:
Mouse   234 GWTGKVVYFSATYPYIMLIILF--FRGVTLPGAKEGILFYITPNFRK-LSDSEVWLDAATQIFFS 295

  Fly   751 WGLLGASVIAITSRS--HTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPG 813
            :||...|:||:.|.:  |.|     :.||:|:                :||..            
Mouse   296 YGLGLGSLIALGSYNSFHNN-----VYRDSII----------------VCCIN------------ 327

  Fly   814 SFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFISEIFP 878
                 .| ||:::      .:::......:.|.:         .|::..|.:....|.|::  :|
Mouse   328 -----SC-TSMFA------GFVIFSIVGFMAHVT---------KRSIADVAASGPGLAFLA--YP 369

  Fly   879 -AVLSLASDSISWVWAAVAFATFAGFGL-AQLCVMWKPISSALGNSTSSVLLS---------CVT 932
             ||..|   .||.:||.:.|:.....|: :|.|.: :...:||.:....:|.:         |:.
Mouse   370 EAVTQL---PISPLWAILFFSMLLMLGIDSQFCTV-EGFITALVDEYPRLLRNRRELFIAAVCIV 430

  Fly   933 GLLLSIPFATEMGI--------------SILYYVDF-LLGGSWFIPIIWTAQIFGVFLIRGRPYN 982
            ..|:.:...|:.||              |:|:.|.| .:..|||         :||    .|.|:
Mouse   431 SYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWF---------YGV----NRFYD 482

  Fly   983 GDDLVNDLRLCGSMSA-FLALSWNVLLPI---GLITLSVVDYKASLSNQFYYWRGKSYFTYWSRK 1043
                 |...:.||... :..|.|:...||   |:...|.|....       ...|...|..|.:.
Mouse   483 -----NIQEMVGSRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTP-------LTMGSYVFPKWGQG 535

  Fly  1044 MGSLIQIGVLLVIPVTAIIQIYRYLAH------GPPDILERIQLLYRP------PEEGEEPRRPS 1096
            :|.|:.:..:::||        .|:|:      |  .:.:|:|::.:|      ||.|  |.:|.
Mouse   536 VGWLMALSSMVLIP--------GYMAYMFLTLKG--SLKQRLQVMIQPSEDIVRPENG--PEQPQ 588

  Fly  1097 ARQTASQ 1103
            |..:||:
Mouse   589 AGSSASK 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 123/513 (24%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 6/31 (19%)
SLC6sbd_GAT1 2..599 CDD:212075 168/721 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 8/21 (38%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.

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