DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a18

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001035782.1 Gene:Slc6a18 / 22598 MGIID:1336892 Length:615 Species:Mus musculus


Alignment Length:697 Identity:146/697 - (20%)
Similarity:243/697 - (34%) Gaps:207/697 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 MCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTINFGGN-F 531
            |..||...||..:...:          .:|.:.....|:.||..:|:.|:.||..|....||. |
Mouse     1 MAQASGMDPLVDIEDER----------PKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAF 55

  Fly   532 LLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAW 595
            |:.:.:..|..||||.::::.:|.::|.|.:.:|| |||...|||:........::||....|.|
Mouse    56 LIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLW 120

  Fly   596 ILVYLRDVF----PTAA------RSG------------YRWQEMAFPYRYDASNATGNLTQTVAE 638
            :|.:..:.|    |.:.      |:|            |.|.........|.|| ||.:      
Mouse   121 VLWFFLNSFQHPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISN-TGTI------ 178

  Fly   639 YFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALI--WAAVFLILCKGLKSLGKLAYIIYTLP 701
                                        |...:|.|:  |:.|:|.:.:|::|.||:.|.....|
Mouse   179 ----------------------------QWKLFLCLVACWSTVYLCVIRGIESTGKVIYFTALFP 215

  Fly   702 LVALAV----------VTAKFVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGA 756
            .:.|.:          .|...:|:..|:.           ..|.|...|..|..:.|.:..|...
Mouse   216 YLVLTIFLIRGLTLPGATEGLIYLFTPNM-----------KTLQNPRVWLDAATQIFFSLSLAFG 269

  Fly   757 SVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCY 821
            ..||..|.:....|   ..:||:::.|...: ..|.|.:|            ::....|:..:.|
Mouse   270 GHIAFASYNPPRNN---CEKDAVIIALVNSM-TSLYASIA------------IFSVMGFKASNDY 318

  Fly   822 -----TSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMI-----HVE-------SGFQA 869
                 .:|.||.:..:...||..|...|....::..|.......:     |:|       || ..
Mouse   319 GRCLDRNILSLINEFDLPELSISRDEYPSVLMYLNATQTARVAQLPLKTCHLEDFLDKSASG-PG 382

  Fly   870 LRFISEIF-PAVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSVLLSCVTG 933
            |.||  :| .|||.:...|   ||:.:.|......||          ||..||....:......|
Mouse   383 LAFI--VFTEAVLHMPGAS---VWSVLFFGMLFTLGL----------SSMFGNMEGVITPLLDMG 432

  Fly   934 LL-LSIPFATEMGISILYYVDFL--------LGGSW-----------------FIPIIWTAQIFG 972
            :| ..||  .|:...::.:..||        .||.|                 |:.::....|:|
Mouse   433 ILPKGIP--KEVMTGVICFACFLSAICFTLQSGGYWLEIFDSFAASLNLIIFAFMEVVGVIHIYG 495

  Fly   973 VFLIRGRPYNGDDLVNDLRLCGSM--------SAFLALSWNVLLPIGL--ITLSVV--------D 1019
            :                .|.|..:        ..:..::|.|:.|:.|  |.||.:        .
Mouse   496 M----------------KRFCDDIEWMTGRRPGLYWQVTWRVVSPMLLFGIFLSYIVLLIQTPPS 544

  Fly  1020 YKASLSNQFYYW--RGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQI 1064
            ||| .:.|:.::  |.:.::..|.:....|:.....|.:|..|:.|:
Mouse   545 YKA-WNPQYEHFPSREEKFYPGWVQVTCVLLSFLPSLWVPGVALAQL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 120/554 (22%)
Slc6a18NP_001035782.1 SLC6sbd_B0AT3 16..591 CDD:212086 141/682 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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