DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and snf-6

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:735 Identity:167/735 - (22%)
Similarity:273/735 - (37%) Gaps:212/735 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 WPHAGSRTLALIGCTLGVFNMCRFAVLTINFGG-NFLLQFLLLSVIFGIPLLWLQMCLGAKIRAG 560
            |.:.....||:||.|.||.:..:|..|....|| .||:.:|.:..:..:|:.:::|.||....:.
 Worm    67 WSNKSDYLLAVIGFTAGVGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMVLGQFSSSA 131

  Fly   561 PVSMWKISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFP-----TAARSGYRWQEMAFP 620
            .:|:||:.|:..|:|.|.|....|.|::..:..||.|.||.:.|.     :...:.:..:.....
 Worm   132 AISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNCANSWSGENCTLG 196

  Fly   621 YRYDASNATGNLT---QTVAEY--FNVVVLQRLH-LANHPDASGIRFHVND-----------RQL 668
            .|.......|.|.   ..:.|:  .|...:..|| |.:.|   .:::..||           ..|
 Worm   197 TRIQCKEMNGTLLVNGSCIVEHASSNETTVIPLHDLGSIP---SLKYFHNDVLMLSKGVDDFGTL 258

  Fly   669 AFYLAL----IWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASD 729
            .:||.|    .|.||||.|.:|:||.||:.|:...:|.:.|.|:..:.: .:|.|.....:..:.
 Worm   259 NWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFIILTVLLTRLL-TLDGSLAAVFYFLTP 322

  Fly   730 FDDFLVNSNSWTAATQETFLTWGLL--GASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLM 792
            ..:.|::.:.|..|..:.|.:....  |...||..||.|.|..|      .|.|||...:.:.|:
 Worm   323 KWEILMDLHVWGEAAVQAFYSVSCCSGGLFTIASYSRFHNNIYK------DIWLVLIVDVIVSLV 381

  Fly   793 ALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRN 857
            ..|....|     .|:.          ||....||..                            
 Worm   382 GCLLTFSA-----IGFT----------CYEFAISLDK---------------------------- 403

  Fly   858 RTMIHVESGFQ-ALRFISEIFPAVLSLASDSISWVWAAVAF--------ATFAGFGLAQLCVMWK 913
               .|:..||. ...|::|      :||..|::.::|.:.|        ||       |:.|:..
 Worm   404 ---FHIRDGFHLVFVFLAE------ALAGVSVAPLYAGLFFIMILLVVHAT-------QMFVVET 452

  Fly   914 PISS-------ALGNSTSSVLLS-CVTGLLLSIPFATEMGISILYYVD----FLLGGSWFIPIIW 966
            .:||       .|..:...||.: |...:||||||....|   |::::    |:|  :|.:.:|.
 Worm   453 IVSSICDEYPERLRRNRRHVLTTVCALFILLSIPFCLSSG---LFWMELLTQFVL--TWPLVVIA 512

  Fly   967 TAQIFGVFLIRGRPYNGDDLVNDLR-------------------LCG----SMSAFLALSWNVLL 1008
            ..:...:..:    |..|:::::.:                   :|.    ::..||.|.||   
 Worm   513 FLECMAINWV----YGVDNMLDNAKWIVGYWPPCYIFWKILFKFICPMVYLAILCFLWLDWN--- 570

  Fly  1009 PIGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQI--------- 1064
                    .:.|:   |.||.||   |..|.|      .|....|::||:..|.|.         
 Worm   571 --------SIQYE---SYQFPYW---SILTAW------CIASFPLILIPIVGIWQFCIAKGTITQ 615

  Fly  1065 --YRYL----AHGPPDILERIQLLYRPPEEGEEPRR---PSARQTASQSRRNALGQTTEGGQHDA 1120
              :|.|    |.||...:.|.:   :.|.:..|.||   |...:.||.  |..|           
 Worm   616 KWWRVLYPDDAWGPAMAIHRAE---KFPLQIPEARRLLLPPEVEIASS--RGVL----------- 664

  Fly  1121 QNDAPPKYTPPPSYTTATGA 1140
            |.:.|..|    .|.|::.|
 Worm   665 QEEMPMSY----DYNTSSAA 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 122/524 (23%)
snf-6NP_001367976.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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