DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and snf-12

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_509527.1 Gene:snf-12 / 181143 WormBaseID:WBGene00004911 Length:1022 Species:Caenorhabditis elegans


Alignment Length:1061 Identity:215/1061 - (20%)
Similarity:361/1061 - (34%) Gaps:357/1061 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 SSRMPSPVSLPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPLH---QLQL-----LLRE 489
            ||.:..|:| .:.||..|.||      ||.:||..:.:....||..| |   |.||     ||| 
 Worm    94 SSSVAPPLS-RTISSLPGVSS------PDVIQTIDVSALEDQTPQRP-HWWDQFQLYRRTDLLR- 149

  Fly   490 KCGFNSQ------WPHAGSRTLALIGCTLGVFNMCRFAVLTINFGGN-FLLQFLLLSVIFGIPLL 547
               |:.|      |.......|:.:|..:||.:..||.......||. |.:.:|...:.||:||:
 Worm   150 ---FSKQNDRRELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFGLPLV 211

  Fly   548 WLQMCLGAKI-RAGPVSMWKISPICAGVGIALVMQQCFLALYSTVSLAWILVY---------LRD 602
            :|.:.||... :|...:..::.||.:|||.|||:....:|:|..:.:||.:.|         |.|
 Worm   212 FLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGD 276

  Fly   603 VFPTAARSGYRWQEMAFPYRYD-----------ASNATGNLTQTVAEYFNVVVLQRLHLANHPD- 655
            ..|        |:.....::.|           ..|:|.::|...|.:.:.|    |.|:...| 
 Worm   277 ELP--------WETCRDEWQLDNRCCNLHNLHSCFNSTNSITAPEAFFHSEV----LSLSTFGDF 329

  Fly   656 ASG-IRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAK-------- 711
            |.| ::.|     |...||..|..||..:.|||.|:.:...:..|:|.:.|:::..:        
 Worm   330 ALGPLQSH-----LVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPYLLLSILLLRGISLPGAN 389

  Fly   712 ----FVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKA 772
                |::.||.::             |.....|.:|.::.|...|:....:|::.:.|....|  
 Worm   390 KGLTFLFTVDSTK-------------LWKWQIWKSAAEQVFYELGIDAGPLISMAAFSRYRNN-- 439

  Fly   773 ALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTN----- 832
             :.||::|||:       :.||.:.....:::.               :....:.:||:|     
 Worm   440 -IYRDSVLLVI-------MDALTSCLSGMVIFS---------------FVGFIASESNSNVNDVL 481

  Fly   833 ---PYLLSYPRSLIPHYSSFI--GETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDSISWVW 892
               |..||:  ::.|..:||:  |..:                   :.:|..:|.||:....:.|
 Worm   482 KHDPLYLSF--TVYPGVTSFMYWGGLW-------------------ATLFFGMLVLAAIDAEFAW 525

  Fly   893 AAVAFATFAG-FGLAQLCVMWKPISSALGNSTSSVLLSCVTGLLLSIPFATEMGISILYYVDFLL 956
            ..:..:.|.. |.:.         :.|:.|...:.|  |:.|..|.:|...:.||.:.:.:: .|
 Worm   526 LEMIASAFMNHFSMK---------NKAVENRLLAFL--CLAGFFLGLPLCAQGGIFVFHAIE-NL 578

  Fly   957 GGSW------FIPIIWTAQIFGVFLIRGRPYNGDDLVNDL---------------RL-------C 993
            ..:|      .:.:.....::|:          |:.:.|:               ||       .
 Worm   579 NANWNSFSLALLSVAIVCYVYGI----------DNYLTDISAMLRVPRIQISKATRLKEKLIYFF 633

  Fly   994 GSMSAFLALSWNVLLPIGLITL---SVVDYK--------ASLSNQFYYWRGKSYFTYWSRKMGSL 1047
            |....::..|...:.|:.|..|   ||:.|:        ..:..:...|               :
 Worm   634 GPGGIYIKFSLCFICPVILTVLLVASVLGYQRISFAGRPIPIDYEIVAW---------------I 683

  Fly  1048 IQIGVLLVIPVTAIIQIYRYLAHG---------------PPDILERIQLLYRPPEEGEEPRRPSA 1097
            :.||.|||:|:.|.:||.:....|               ..|.||...|..|...:.|.|  |:.
 Worm   684 VMIGPLLVVPLVAFMQIRQIRNEGKLLKSLFDTSEWRESQDDSLEPKDLYMRQSGKFESP--PNR 746

  Fly  1098 RQTAS-------------------QSRRNALGQTTE------GGQHDAQ---NDAPPKYTPPPSY 1134
            |:|.:                   :||...||.:.:      |...|.|   .:....|:...|.
 Worm   747 RRTPTIFTHRENTYMYIDSRGPTVRSRVFPLGASLDPYGWKAGRLRDRQQQIEETASNYSEEDSA 811

  Fly  1135 TTAT-----------------GA--------------------------------RLAKLLRQSI 1150
            ||.:                 |:                                |:...|.|::
 Worm   812 TTNSFMASTVKHNDDMELTLFGSPPAILGDDEKIMTTRFSESMPVNYKCRNVEVPRIPNKLPQNM 876

  Fly  1151 RRSVRRVLGDSSRTRPVLSLDAESASPAAPPDYLTILTNPAGSSFNADPSPASSSSPESIEI--- 1212
            .|..|:.  ...|:.|..|......||..||        |......::|...:|....|.||   
 Worm   877 ERMARKT--RKKRSSPSASDPPVPTSPLPPP--------PKLQHCRSEPPMMNSKESHSPEIITP 931

  Fly  1213 -DQRPVGYSQRSQSLGRKLHRSGASTLERRPYTAEDVVT---------------------ILRSS 1255
             |..| ..|..|........|  .:|:.||..:.:|..|                     .|.|.
 Worm   932 GDDSP-SISNSSDDSSDDCFR--RATVIRRKTSDDDAFTHFSTATAESISITPLDFPRQRSLSSV 993

  Fly  1256 VRHRQSQGGGNLVTASTLPRP 1276
            ..:.|.|..|.....|.|.||
 Worm   994 AIYDQEQKNGRSKVLSQLKRP 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 107/527 (20%)
snf-12NP_509527.1 SLC6sbd 158..660 CDD:271359 117/599 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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