DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and snf-9

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:711 Identity:155/711 - (21%)
Similarity:262/711 - (36%) Gaps:212/711 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 SSRMPSPVS--LPSDSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNS 495
            |.||.||..  .|||      |||..||.   :.||.:..:.|:..:|...      .:.|  ..
 Worm     5 SERMTSPTQRRSPSD------SSAAEDQR---IATTIVRDSGSSKEIEESQ------ADPC--RG 52

  Fly   496 QWPHAGSRTLALIGCTLGVFNMCRFAVLTINFGGN-FLLQFLLLSVIFGIPLLWLQMCLGAKIR- 558
            .|.:.....|:.:|..:|:.|:.||.....|.||: ||:.::..:::||:|.::|:..||...| 
 Worm    53 AWGNQIEFLLSTLGMAVGLGNIWRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRT 117

  Fly   559 AGPVSMWKISPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAA----RSGYRW----- 614
            ..|:...:.:||..|||...|.....:|:|..:.:.|..||:..:.....    |.|..|     
 Worm   118 TAPIIFRRFAPILQGVGWMAVAVSSLVAIYYIIIIGWSTVYMASIVMGHTSKWNRCGNSWNNAES 182

  Fly   615 ------QEMAFPYRYDASNATGNLTQTV-----AE-------YFNVVVLQRLHLANH-------- 653
                  |.:...:     |||||.|..|     :|       |.|.....::.|..:        
 Worm   183 CVDSGLQPLCASF-----NATGNETSPVWANLSSEGRGKFYIYLNTSCYDKVDLEFNKTKMIAAT 242

  Fly   654 ----------PDASGIRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVV 708
                      |....:.|...:.:..|.:...|..|.|||.||:..:||.:|:|.|||.      
 Worm   243 EQYFFDYVVKPTDGFLEFSSINFKSFFGMNACWLIVVLILWKGVGYMGKASYVIVTLPY------ 301

  Fly   709 TAKFVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFL--TWG--------LLG---ASVIA 760
               |:.::...|...:..|.|...:.:.:..|:    :.|:  |||        .||   ..:|.
 Worm   302 ---FIIILLFFRGITLDGAEDGIYYYLGNPDWS----KVFMPATWGEALKQLCFSLGIGYGGLIG 359

  Fly   761 ITSRSHTNANKAALRRDAILLV----LFTLIG-------LGLMALLALCCAQILWQHG----YVY 810
            :.|.|..|.|   ..|||::::    :.:|:|       ||.:|....|....:...|    :|.
 Worm   360 MASFSKPNNN---CFRDALIVIIGDTMMSLVGGAAVFSTLGFLAKKKGCSVAEVVNDGFSLAFVA 421

  Fly   811 VP---GSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRF 872
            .|   |....|:.::.::        :|:.:          |:|         |..|..:..: |
 Worm   422 FPEALGRMPLPELWSFLF--------FLMLF----------FLG---------ISTEVAYVNV-F 458

  Fly   873 ISEIFPAVLSLASDS--ISWVWAAVAF------ATFAGF-----------GLAQLCVMWKPISSA 918
            .|.|....::|....  ::.:|..|.:      .|..||           |::..|.:       
 Worm   459 CSSICDQFVNLRKRKWLVAVLWCLVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAV------- 516

  Fly   919 LGNSTSSVLL-SCVTGLLLSIPFATEM------------GISILYYVDFLLGGSWFIPIIWTAQI 970
                |:.||: :.|.|....:....||            |....|:     |.:|    ::...:
 Worm   517 ----TAEVLIVAYVYGRRNQLADMKEMFGESKNKCTSWIGQHSPYF-----GFNW----MFVTPV 568

  Fly   971 FGVFL-----IRGRPYNGDDLVNDLRLCGSMSAFLALSWNV-LLPIGLITL----SVVDYK 1021
            .|..|     ||..||..|:...::    ...||..:.|.| |||:.|:.:    :.|::|
 Worm   569 LGSILIVLASIRQYPYQTDENKPNM----YPLAFDIVGWAVCLLPMALVPIFAFCAFVEFK 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 121/589 (21%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 122/593 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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