DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and snf-1

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_491491.2 Gene:snf-1 / 172119 WormBaseID:WBGene00004900 Length:617 Species:Caenorhabditis elegans


Alignment Length:706 Identity:155/706 - (21%)
Similarity:261/706 - (36%) Gaps:175/706 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 WPHAGSRTLALIGCTLGVFNMCRF----AVLTINFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKI 557
            ||   |:...::.....:|.|..|    .::..|.|..|...:.::..:..:|.:.::|.:|...
 Worm    24 WP---SKIEFIVSAMAYLFAMTNFLNLPKLILENGGVAFAAAYAIVVGVLCMPTMVMEMSIGQVT 85

  Fly   558 RAGPV-SMWKISPICAGVGIA-----LVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQE 616
            ...|| :.:.:.|:..|:|::     :|:..|.....||:.|  .|.|....| .|.|||..|..
 Worm    86 GRAPVLAFYHLFPVFRGIGVSQILFTMVVLACMTKFLSTLCL--FLYYYFWTF-HAGRSGLPWLN 147

  Fly   617 -MAFPYRY-----DASNATGNLTQTVAEYFNVV-----VLQRLHLANHPDASGIRFHVNDRQLAF 670
             .|||...     :|.:.| |:|| :....|.:     ::|.|.....|..|...|  .|.|...
 Worm   148 CKAFPEFVSQPCREAGSIT-NITQ-INNRLNTIQAESSMMQFLTTLERPSESIADF--KDFQYPI 208

  Fly   671 YLA--LIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIF-AASDFDD 732
            .:|  .||.|:|:.:|.|::.:||....:..|...:|.|...:...:...:.|..|: .|:|::.
 Worm   209 LIAQGAIWIAIFVAICFGVRFVGKTVAFVLMLAFSSLLVFFLRSATLGGVTEILEIYWKATDWEK 273

  Fly   733 FLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLAL 797
             |.:...|..|.::..|..|:...:.|.::|....:.|   |..|:|.|.::.|| :..:..:::
 Worm   274 -LADYQVWRLAIEQAILGTGIGYGAFITMSSYMKRSNN---LVCDSIFLSVWHLI-ISFVQTMSI 333

  Fly   798 CCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNP------------YLLSYPRSLIPHYSSFI 850
            .|..     ||:                |::...:|            |:|:|. |.:|      
 Worm   334 ICIV-----GYL----------------SMKLGIHPTELLETGEDQMWYMLAYV-SYLP------ 370

  Fly   851 GETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPI 915
                       .:.||......|..:|..:..||...:|         ||               
 Worm   371 -----------KLWSGVLLTICICTMFSVITILALSVLS---------TF--------------- 400

  Fly   916 SSALGNSTSS-------VLLSCVTGLLLSIPFATEMG--------ISILYYVDFLLGGSWFIPII 965
            ..|.|.:.|.       .|..|:....|::.|||..|        .||.|..         |..|
 Worm   401 EDAFGENWSKCCRRFFLALFVCLFCFGLTVYFATNAGRHAYELATRSIKYCT---------IYFI 456

  Fly   966 WTAQIFGVFLIRGRPYNGDDLVNDLR-LCGSMSAFLALSWNVLLPI---GLITLSVVDYK-ASLS 1025
            .||::|...........|.||.|.:| .|.|......|.:..||||   |:..|:.:||| :|.|
 Worm   457 LTAELFATAWFYCAHKLGKDLHNMMRSRCCSCFGHFFLYFTYLLPILPAGVAFLNALDYKFSSFS 521

  Fly  1026 NQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPPEEGE 1090
            ...:.|:       :|..:|  |.|.::.:||    |.:|.::.           :|.....:|:
 Worm   522 APIHEWK-------YSEYVG--IAIAMVPLIP----IPLYFFMT-----------ILCACCCKGK 562

  Fly  1091 EPRRPSARQTASQSRRNALGQTTEGGQHDAQNDAP-PKYTP-PPSYTTATGARLAK 1144
            :..:...|      .|.......:...|..:...| |:||. .|.|.....|.||:
 Worm   563 DHAKTCKR------IRTVFAARLQNHHHRDEKAQPIPRYTSNAPGYLLLPQAPLAE 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 111/525 (21%)
snf-1NP_491491.2 SNF 21..554 CDD:264495 141/640 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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