DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a13

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:730 Identity:160/730 - (21%)
Similarity:270/730 - (36%) Gaps:188/730 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 DSSSSGSSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIG 509
            |:..||::|   :.|..||     |..     :|.:.:...|.||      ||.:.....|::.|
  Rat     2 DNRVSGTTS---NGETKPV-----CPV-----MEKVEEDGTLERE------QWTNKMEFVLSVAG 47

  Fly   510 CTLGVFNMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW-KISPI-- 570
            ..:|:.|:.||..|.. |.||.|.:.:|:.....|||:.:|:..||.....|.::.| ||.||  
  Rat    48 EIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRKICPIFE 112

  Fly   571 ----CAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSG---YRWQE---MAFPYRYDA 625
                ..|:|.|..|....|.:|..|.|||.|.||...|.|....|   :.|..   :.|....::
  Rat   113 ASVPSPGIGYASQMIVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKTNNS 177

  Fly   626 SNATG-NLTQTVAEYFNVVVLQRLHLANHPDASGIRFHVNDR--QLAFYLALIWAAVFLILCKGL 687
            .|.|. |.|..|.|::...||:        .:.||: |:...  :|...|.|.|...:..:.||:
  Rat   178 LNVTSENATSPVIEFWERRVLK--------ISDGIQ-HLGSLRWELVLCLLLAWIICYFCIWKGV 233

  Fly   688 KSLGKLAYIIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDDFLVNSN--------SWTAAT 744
            ||.||:.|...|.|.:.|.|:..:.|.:  |...|.|       .|.:..|        .|..|.
  Rat   234 KSTGKVVYFTATFPYLMLVVLLIRGVTL--PGAAQGI-------QFYLYPNITRLWDPQVWMDAG 289

  Fly   745 QETFLTWGLLGASVIAITS--RSHTNANKAALRRDAILLVLFT-----LIGLGLMALLALCCAQI 802
            .:.|.::.:....:.|:.|  :.|.|.     .||.:.|.:..     :.|..:.::|..    :
  Rat   290 TQIFFSFAICLGCLTALGSYNKYHNNC-----YRDCVALCILNSSTSFVAGFAIFSILGF----M 345

  Fly   803 LWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYL--LSYPRSLIPHYSSFIGETYRRNRTMIHVES 865
            ..:.|   ||            .|..:.:.|.|  ::|||:::                      
  Rat   346 SQEQG---VP------------ISEVAESGPGLAFIAYPRAVV---------------------- 373

  Fly   866 GFQALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGLAQ--LCV---------MWKPISSAL 919
                      :.|         .|.:||...|......||..  :||         |:..:....
  Rat   374 ----------MLP---------FSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPRVFRKK 419

  Fly   920 GNSTSSVLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSW---FIPI---IWTAQIFGVFLIRG 978
            ......:|:..|....:.:...||.|:.:....|:......   |:.|   :..|.::|.    .
  Rat   420 NRREILILIVSVVSFFIGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGA----S 480

  Fly   979 RPY-NGDDLVND-----LRLCGSMSAFLALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGK 1034
            |.| |.:|::..     ::.|          |....|   :.....|::.|.....|:.|     
  Rat   481 RFYDNIEDMIGYKPWPLIKYC----------WLFFTPAVCLATFLFSLIKYTPLTYNKKY----- 530

  Fly  1035 SYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRPPEEGEEPRRPSARQ 1099
             .:.:|...:|.|:.:..::.||..:|.:: |.| .||  :.||::.|..|.|  :.|::.....
  Rat   531 -TYPWWGDALGWLLALSSMVCIPAWSIYKL-RTL-KGP--LRERLRQLVCPAE--DLPQKSQPEL 588

  Fly  1100 TASQSRRNALGQTTE 1114
            |:..:...:|.:.||
  Rat   589 TSPATPMTSLLRLTE 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 115/525 (22%)
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:444915 145/663 (22%)

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