DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and Slc6a5

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_976079.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:799 Species:Rattus norvegicus


Alignment Length:921 Identity:193/921 - (20%)
Similarity:330/921 - (35%) Gaps:280/921 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 DCQA----SVAPTVGSQMLTEAHIFDNLLQTNARASSEEPR-PR---QYGRRLEGPPTPVRPLIL 394
            ||.|    :..||             |:|:.......:.|| ||   :.......|...|:|..:
  Rat     2 DCSAPKEMNKPPT-------------NILEATVPGHRDSPRAPRTSPEQDLPAAAPAAAVQPPRV 53

  Fly   395 AQSRP------QSAPTRV-----------QMREPQLQDTPTHPIMSTCSELSSARSSRMPSP--- 439
            .:|..      |||..|.           ::..||.|.|     .:...:||...|::...|   
  Rat    54 PRSASTGAQTFQSADARACEAQRPGVGFCKLSSPQAQAT-----SAALRDLSEGHSAQANPPSGA 113

  Fly   440 --------VSLPS-------DSSSSGSSSAEHDQEPDPV------QTTTMCS------------A 471
                    ..:|:       ::.|....:.||:..| ||      |:|.:..            |
  Rat   114 AGAGNALHCKIPALRGPEEDENVSVAKGTLEHNNTP-PVGWVNMSQSTVVLGTDGIASVLPGSVA 177

  Fly   472 SSTTPLEPLHQLQLLLREKCGFN---SQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGNFL 532
            ::|.|.:          |:...|   ..|.......|:::|..:|:.|:.||..|.. |.||.||
  Rat   178 TTTIPED----------EQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFL 232

  Fly   533 LQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIALVMQQCFLALYSTVSLAWIL 597
            :.:|::..:.|:|:.:|::.||.....||||:||..|...|.|||:::....:|:|..|.:.:.|
  Rat   233 IPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTL 297

  Fly   598 VYLRDVFPTAARSGYRWQEMAFPY----------------------RYDASNAT------GNLTQ 634
            .||...|.    |...|.....|:                      :....|:|      .|||.
  Rat   298 FYLFASFV----SVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAYPNLTM 358

  Fly   635 T-------------VAEYFNVVVLQRLHLANHPDASGIRFHVNDR-QLAFYLALIWAAVFLILCK 685
            .             ..|||...||:        .::||.:....| .|.|.|.|.|..|:..|.|
  Rat   359 VNFTSQANKTFVSGSEEYFKYFVLK--------ISAGIEYPGEIRWPLPFCLFLAWVIVYASLAK 415

  Fly   686 GLKSLGKLAYIIYTLPLVALAVVTAKFV----------YVVDPSRIQNIFAASDFDDFLVNSNSW 740
            |:|:.||:.|...|.|.|.|.::..:.|          |.:.|..           :.|.::..|
  Rat   416 GIKTSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKW-----------EKLTDATVW 469

  Fly   741 TAATQETFLT----WGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQ 801
            ..|..:.|.:    ||  |...::..::.|.|.     .||. |:|..|.....:.|        
  Rat   470 KDAATQIFFSLSAAWG--GLITLSSYNKFHNNC-----YRDT-LIVTCTNSATSIFA-------- 518

  Fly   802 ILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESG 866
                 |:|              |:|:                      ||  :..|...:::|:.
  Rat   519 -----GFV--------------IFSV----------------------IG--FMANERKVNIENV 540

  Fly   867 FQ---ALRFISEIFPAVLSLASDSISWVWAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSVLL 928
            ..   .:.|:  ::|..|:..  .:|..||.:.|......||..:....:.|.:::.:.....|.
  Rat   541 ADQGPGIAFV--VYPEALTRL--PLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYLR 601

  Fly   929 S---------CVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGD 984
            :         |:...::..|..|:.||.:...|| ....|:.:.||...::.|:..:.|..    
  Rat   602 THKPVFTLGCCICFFIMGFPMITQGGIYMFQLVD-TYAASYALVIIAIFELVGISYVYGLQ---- 661

  Fly   985 DLVNDLRLCGSMSAFLALSWNVLLPI--GLITLSVVDYKASLSNQFYYWRGKSYFTY----WSRK 1043
                  |.|..:...:....|:...:  ..:|.:::.:....|  ||.|...:|.:|    ||..
  Rat   662 ------RFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFS--FYQWEPMTYGSYRYPNWSMV 718

  Fly  1044 MGSLIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRP-PEEGEEPRRPSARQTASQSRRN 1107
            :|.|:....::.||:..:|::  |||  |...:||::|:..| |:.|     |...|...:..:|
  Rat   719 LGWLMLACSVIWIPIMFVIKM--YLA--PGRFIERLKLVCSPQPDWG-----PFLAQHRGERYKN 774

  Fly  1108 ---ALGQTTEG 1115
               .||.::.|
  Rat   775 MIDPLGTSSLG 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 117/543 (22%)
Slc6a5NP_976079.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64 15/74 (20%)
SLC6sbd_GlyT2 193..789 CDD:271389 152/701 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.