DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a9

DIOPT Version :10

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_006238687.1 Gene:Slc6a9 / 116509 RGDID:621243 Length:638 Species:Rattus norvegicus


Alignment Length:719 Identity:158/719 - (21%)
Similarity:268/719 - (37%) Gaps:185/719 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 PVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI- 525
            ||.|::. ..:...|.|...:.|.|.|      ..|.:.....|..:|..:|:.|:.||..|.. 
  Rat     7 PVATSSP-EQNGAVPSEATKKDQNLTR------GNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYR 64

  Fly   526 NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWKISPICAGVGIALVMQQCFLALYST 590
            |.||.|:..:.::.|..||||.::::..|.....|.:.:|:|||:..|||..:::...::.:|..
  Rat    65 NGGGAFMFPYFIMLVFCGIPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYN 129

  Fly   591 VSLAWILVY----LRDVFPTAARSGYRWQEMAFPYR-------YDASNAT---------GNL--- 632
            |.:.....|    :..|.|        |.....|:.       .||||.|         |||   
  Rat   130 VVICIAFYYFFSSMTHVLP--------WAYCNNPWNTPDCAGVLDASNLTNGSRPTALSGNLSHL 186

  Fly   633 -------TQTVAEYFNVVVLQRLHLANH-PDASGIRFHVNDRQLAFYLALIWAAVFLILCKGLKS 689
                   |....||:.:.||:   |::. .|...:|.     .|...|.:.|..|||.|.:|:||
  Rat   187 FNYTLQRTSPSEEYWRLYVLK---LSDDIGDFGEVRL-----PLLGCLGVSWVVVFLCLIRGVKS 243

  Fly   690 LGKLAYIIYTLPLVALAVVTAK----------FVYVVDPSRIQNIFAASDFDDFLVNSNSWTAAT 744
            .||:.|...|.|.|.|.::..:          .:|.:.|..           |.::.:..|..|.
  Rat   244 SGKVVYFTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPKW-----------DKILEAKVWGDAA 297

  Fly   745 QETFLT----WGLLGASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQ 805
            .:.|.:    ||  |...:|..::.|.|.     .||::::.:                      
  Rat   298 SQIFYSLGCAWG--GLITMASYNKFHNNC-----YRDSVIISI---------------------- 333

  Fly   806 HGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQAL 870
                        .:|.||:|:      .:::.   |::...::.:|....|      |......|
  Rat   334 ------------TNCATSVYA------GFVIF---SILGFMANHLGVDVSR------VADHGPGL 371

  Fly   871 RFISEIFPAVLSLASDSISWVWAAVAFATFAGFGL-AQLCVMWKPISS---ALGN------STSS 925
            .|::  :|..|:|.  .||.:|:.:.|......|| .|.|::...:::   .:||      .|..
  Rat   372 AFVA--YPEALTLL--PISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYV 432

  Fly   926 VLLSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGVFLIRGRPYNGDDLVNDL 990
            .|...|.|.||.||..::.||..|..:| ....|:.:.:|.......:..|.|......|:  .:
  Rat   433 TLGVAVAGFLLGIPLTSQAGIYWLLLMD-NYAASFSLVVISCIMCVSIMYIYGHRNYFQDI--QM 494

  Fly   991 RLCGSMSAFLALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGV 1052
            .|......|..:.|..:.|   ..::..:|:.|:....|.:.|       ..|:..:|.|:.:..
  Rat   495 MLGFPPPLFFQICWRFVSPTIIFFILIFTVIQYRPITYNHYQY-------PGWAVAIGFLMALSS 552

  Fly  1053 LLVIPVTAIIQIYR----------YLAHGP-----PDILERIQLLYRP-----PEEGEE--PRRP 1095
            ::.||:.|:.|:.|          ..|..|     |.:||.....|.|     ||:|.|  |..|
  Rat   553 VICIPLYALFQLCRTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTTTPSPEDGFEVQPLHP 617

  Fly  1096 SARQ 1099
            ...|
  Rat   618 DKAQ 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 116/530 (22%)
Slc6a9XP_006238687.1 SLC6sbd_GlyT1 16..599 CDD:212067 146/685 (21%)

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