DRSC/TRiP Functional Genomics Resources

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Protein Alignment bdg and Slc6a20

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:679 Identity:146/679 - (21%)
Similarity:256/679 - (37%) Gaps:223/679 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 QWPHAGSRTLALIGCTLGVFNMCRFAVLTINF-GGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRA 559
            ||.:......|.|...:|:.|:.||..|...: ||:||:.:|::.::.|:|||:|::.:|.::|.
  Rat    31 QWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGMPLLYLELAVGQRMRQ 95

  Fly   560 GPVSMWK-ISPICAGVGIALVMQQCFLALYSTVSLAWILVYL----RDVFP------TAARSGYR 613
            |.:..|: |||..:|||:|.|:...||::|..|..||...||    :|..|      .:.|:||.
  Rat    96 GSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVCPLNSNRTGYD 160

  Fly   614 WQ-EMAFPYRYDASNATGNLTQTVAEYFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALIWA 677
            .: |.|...:|.....|.|::.::.|                 ..|:::     :.|..|.|.|.
  Rat   161 EECEKASSTQYFWYRKTLNISPSIQE-----------------NGGVQW-----EPALCLTLAWL 203

  Fly   678 AVFLILCKGLKSLGKLAY----------IIYTLPLVALAVVTAKFVYVVDPSRIQNIFAASDFDD 732
            .|:|.:.:|.:|.||:.|          |||.:..:.|...|...:|:..|...|          
  Rat   204 MVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLTLHGATNGLMYMFTPKIEQ---------- 258

  Fly   733 FLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAIL-------------LVLF 784
             |.|..:|..|..:.|.:.||...|:||..|.:..:.:   .::.|::             :|.|
  Rat   259 -LANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSND---CQKHAVIVSVINSSTSIFASIVTF 319

  Fly   785 TLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLS-YPRSLIPHYSS 848
            ::.|.........|..:::     :.:..||:..|.:.:..:|: ....||.| ||..       
  Rat   320 SIYGFKATFNYENCLNKVI-----LLLTNSFDLEDGFLTASNLE-EVKDYLASTYPNK------- 371

  Fly   849 FIGETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDS------------------------IS 889
                                    .||:||.:.:.:.:|                        :|
  Rat   372 ------------------------YSEVFPHIRNCSLESELNTAVQGTGLAFIVYAEAIKNMEVS 412

  Fly   890 WVWAAVAFATFAGFGLAQLCVMWKPISSALGNS-------TSSVLLS------CVTGLLLSIPFA 941
            .:|:.:.|......|:          .|.|||:       |.|.::|      .::||:..|..|
  Rat   413 QLWSVLYFFMLLMLGM----------GSMLGNTAAILTPLTDSKVISSYLPKEAISGLVCLINCA 467

  Fly   942 TEMGISILYYVDFLLGGSWF--------------IPIIWTAQIFGVFLIR----------GRPYN 982
                :.:::.::  .|..||              |.::.|..:..|:.:|          |||.|
  Rat   468 ----VGMVFTME--AGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLRAMTGRPLN 526

  Fly   983 GDDLVNDLRLCGSMSAFLALSWNVLLPIGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSL 1047
            .        ...:|.||:    :.||.|||....:.||..:         |...:..|....|.|
  Rat   527 W--------YWKAMWAFV----SPLLIIGLFIFYLSDYILT---------GTLQYQAWDATQGQL 570

  Fly  1048 IQ----------IGVL-----LVIPVTAI 1061
            :.          ||:|     :.||:.|:
  Rat   571 VTKDYPPHALAVIGLLVASSTMCIPLVAL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 119/562 (21%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
SLC5-6-like_sbd 26..601 CDD:294310 146/679 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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