DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and slc6a12

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:693 Identity:158/693 - (22%)
Similarity:256/693 - (36%) Gaps:151/693 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 TMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVLTI-NFGGN 530
            |:|:.......||          :.....||.:.....|::.|..:|:.|:.||..|.. |.||.
 Frog    18 TLCALGEGRHREP----------EIEDRGQWSNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGA 72

  Fly   531 FLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW-KISPICAGVGIALVMQQCFLALYSTVSLA 594
            |.:.:|:.....|||:.:|:..||.....|.::.| ||.|:..|:|.|..:.:.:|.:|..|.||
 Frog    73 FFIPYLIFLFTCGIPVFFLETALGQYTSQGGITAWRKICPLFEGIGYASQVIEGYLNIYYIVILA 137

  Fly   595 WILVYLRDVFPTA----ARSGYRWQ-EMAFPYRYDASNATG--NLTQTVAEYFNVVVLQRLHLAN 652
            |.|.||...| ||    |.....|. |....:...:.|.|.  |.|.:|.|::...|   |||  
 Frog   138 WALFYLFSSF-TAELPWATCNNTWNTEHCIDFVGKSENFTSLENSTSSVVEFWERRV---LHL-- 196

  Fly   653 HPDASGIRFHVNDR-QLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAK----- 711
               :.||....|.| .||..|.|.|...:..:.||:||.||:.|...|.|.|.|.::..:     
 Frog   197 ---SEGIEHLGNVRWDLALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYVMLIILLVRGVTLP 258

  Fly   712 -------FVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNA 769
                   |....|.:|:|             :...|..|..:.|.::.:....:.|:.|.:..|.
 Frog   259 GAYEGIIFYLKPDMTRLQ-------------DPQVWMDAGTQIFFSYAICQGCLTALGSYNKYNN 310

  Fly   770 NKAALRRDAILLVLFTLI-----GLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQS 829
            |   ..||.|.|.....|     |..:.::|.. .||   :.|   ||            .|..:
 Frog   311 N---CYRDCIALCFLNSITSFVAGFAIFSVLGF-MAQ---EQG---VP------------ISEVA 353

  Fly   830 NTNPYL--LSYPRSLIPHYSSFIGETYRRNRTMIHVESGFQALRFISEIFPAVLSLASDSI---S 889
            .:.|.|  ::||:::                ||:.|...:..|.|:..||   |.|.|..:   |
 Frog   354 ESGPGLAFIAYPKAV----------------TMMPVSPLWSCLFFLMLIF---LGLDSQFVCVES 399

  Fly   890 WVWAAVAFATFAGFGLAQLCVMWKPISSALGNSTSSVLLSCVTGLLLSIPFATEMGISILYYVDF 954
            .|.|.|.              |:..:..........:|...|...||.:...||.|:.:....|:
 Frog   400 LVTAIVD--------------MFPHVFRKKYRREFFILAVAVICYLLGLILLTEGGMYVFQLFDY 450

  Fly   955 LLGGSWFIPIIWTAQIFGVFLIRG--RPY-NGDDLVND-----LRLCGSMSAFLALSWNVLLP-- 1009
            .......:..:...::..|..:.|  |.| |.:|::..     ::.|          |....|  
 Frog   451 YAASGTCLLFVAIFEVICVGYVYGANRFYDNIEDMIGYRPWPLVKYC----------WLFATPAV 505

  Fly  1010 -IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGSLIQIGVLLVIPVTAIIQIYRYLAHGPP 1073
             :|....|::.|.....|..|      .:..|...:|.|:.:..::.||:.|...|.|...    
 Frog   506 CLGTFLFSLIKYSPLKYNNRY------VYPSWGYAIGWLMALSSMICIPIYAFYIILRTKG---- 560

  Fly  1074 DILERIQLLYRPPEEGEEPRRPSARQTASQSRRNALGQTTEGG 1116
            ...:|::.|..|..:..:|:: ..:..|...:...||...:.|
 Frog   561 SFTQRLKQLVTPHTDLPQPKK-YLKDRADPKQIEVLGLEAKDG 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 123/506 (24%)
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:382020 148/634 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.