DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and slc6a11b

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:XP_017213744.2 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:689 Identity:150/689 - (21%)
Similarity:249/689 - (36%) Gaps:177/689 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 SSSAEHDQEPDPVQTTTMCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVF 515
            :..||...:|:....:.:.|.......|               ..||.:.....|::.|..:|:.
Zfish    11 NGKAEESMDPESANPSAVRSNDKKVVNE---------------RGQWNNKVEFVLSVAGEIIGLG 60

  Fly   516 NMCRFAVLTI-NFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW-KISPICAGVGIAL 578
            |:.||..|.. |.||.|.:.:::..|..|||:.:|:..||.....|.::.| |:.|:..|:|.|.
Zfish    61 NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYAT 125

  Fly   579 VMQQCFLALYSTVSLAWILVYLRDVFPTA---ARSGYRWQ-EMAFPYRYDA-SNATGNL-TQTVA 637
            .:.:..|.:|..|.|||.:.||.:.|.|.   |..|:.|. |....:..:: :|.|... |..|.
Zfish   126 QVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANFTNPYSTSPVM 190

  Fly   638 EYFNVVVLQRLHLANHPDASGIRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPL 702
            |::...||:  ..:...:..|:|:     :||..||:.|...:..:.||.||.||:.|:..|.|.
Zfish   191 EFWERRVLK--ISSGIEEVGGLRW-----ELALCLAIAWVICYFCIWKGPKSTGKVVYVTATFPY 248

  Fly   703 VALAVVT------------AKFVYVVDPSRIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLG 755
            ..|.::.            .||....|.||             |.:...|..|..:.|.::.:..
Zfish   249 FMLLILLLRGITLPGAANGIKFYLYPDISR-------------LSDPQVWVDAGTQIFFSYAICL 300

  Fly   756 ASVIAITSRSHTNANKAALRRDAILLVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDC 820
            ..:.|:.|.:..|.|   ..||.::                |||                     
Zfish   301 GCLTALGSYNSYNNN---CYRDCLM----------------LCC--------------------- 325

  Fly   821 YTSIYSLQSNTNPYLLSYPRSLIPHYSSF--IG-ETYRRNRTMIHVESGFQALRFISEIFPAVLS 882
                  |.|.|         |.:..::.|  :| ..|.:|..:..|......|.||:  :|..::
Zfish   326 ------LNSGT---------SFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFIA--YPKAVT 373

  Fly   883 LASDSISW--VWAAVAFATFAGFGLAQLCVMWKPISSA-------------------LGNSTSSV 926
            :    :.|  :|||:.|......||....|..:.:.:|                   ||.|.:|.
Zfish   374 M----MPWAPLWAALFFMMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGYRRELLILGMSIASF 434

  Fly   927 LLSCVTGLLLSIPFATEMGISILYYVDFLLGGSW---FIPI---IWTAQIFGVFLIRGRPY-NGD 984
            .|    ||::    .||.|:.:....|.......   |:.|   |....::|    ..|.| |.:
Zfish   435 FL----GLIM----LTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYG----SDRFYLNIE 487

  Fly   985 DLVNDLRLCGSMSAFLALSWNVLLP---IGLITLSVVDYKASLSNQFYYWRGKSYFTYWSRKMGS 1046
            |::....:     .|:...|....|   .|:....::.||....|..|.:....|...|...|.|
Zfish   488 DMIGYKPI-----FFIKWCWKFFTPGICTGIFLFFLIKYKPLKYNNVYTYPDWGYGIGWMMAMSS 547

  Fly  1047 LIQIGVLLVIPVTAIIQIYRYLAHGPPDILERIQLLYRP 1085
            ::      .||:..:.||::...    ...|||:.|..|
Zfish   548 MV------CIPLGILFQIWKTKG----TFRERIKKLTTP 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 118/524 (23%)
slc6a11bXP_017213744.2 SLC5-6-like_sbd 38..576 CDD:320982 145/660 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.