DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bdg and slc6a18

DIOPT Version :9

Sequence 1:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster
Sequence 2:NP_001108369.1 Gene:slc6a18 / 100141332 ZFINID:ZDB-GENE-080219-9 Length:618 Species:Danio rerio


Alignment Length:678 Identity:139/678 - (20%)
Similarity:251/678 - (37%) Gaps:161/678 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 MCSASSTTPLEPLHQLQLLLREKCGFNSQWPHAGSRTLALIGCTLGVFNMCRFAVL-TINFGGNF 531
            |.:||.|:.::.              ..:|.:.....|..:|..:|:.|:.||..| .|..||.|
Zfish     1 MDTASETSSVQE--------------RPKWDNKVQYLLTCVGFAVGLGNIWRFPYLCQIYGGGAF 51

  Fly   532 LLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMW-KISPICAGVGIALVMQQCFLALYSTVSLAW 595
            |:.:|:..|..|:|||:|::.:|..:|.|.:.:| .|||:..|||:|.::....:.|:....|||
Zfish    52 LIPYLIALVFEGLPLLYLELAIGQSLRKGSIGVWHSISPLLGGVGVASMVVSFLVGLFYNTILAW 116

  Fly   596 ILVY----LRDVFPTAARSGYRWQEMAFPYRYDASNATGNLTQTVA----EYFNVVVLQRLHLAN 652
            :|.|    ..|..|        |.:...     ..|..|.:.:.|:    .|:  ...|.|:::.
Zfish   117 VLWYFFHSFEDPLP--------WSQCPI-----NDNLEGYVEECVSSTPVNYY--WYRQTLNISP 166

  Fly   653 HPDASG-IRFHVNDRQLAFYLALIWAAVFLILCKGLKSLGKLAYIIYTLPLVALAVVTAKFVYVV 716
            ..:.|| :::     .|...||..|:.|::...:|::::||..|:..|.|.:.|.:...:.:.:.
Zfish   167 DIEQSGSLQW-----TLVLCLATAWSIVYICFIRGIETIGKAVYVTATFPYLVLTIFLVRALTLP 226

  Fly   717 DPS-RIQNIFAASDFDDFLVNSNSWTAATQETFLTWGLLGASVIAITSRSHTNANKAALRRDAIL 780
            ..: .:|.:| ..|: ..|.|...|..|..:.|.:..|....:||.:|   .|..|....|||:.
Zfish   227 GATDGLQYLF-TPDW-TLLTNPQVWLDAATQIFFSLSLAFGGLIAFSS---YNPKKNDCERDALF 286

  Fly   781 -------------LVLFTLIGLGLMALLALCCAQILWQHGYVYVPGSFENPDCYTSIYSLQSN-- 830
                         :.:|.::|....:....|                            :.||  
Zfish   287 VGIINSATSLYASIPIFAILGFKATSNFNSC----------------------------VNSNIL 323

  Fly   831 --TNPYLLSYPRSLIPHYSSFIGETYRRN--------------RTMIHVESGFQALRFISEIF-P 878
              ||.:.:......|.:|.|::.:....:              :..:...:....|.||  :| .
Zfish   324 DLTNAFDIGDRNITIENYDSWLRDLNASDPDRVSSLNLKHCVLKNFLDQSASGTGLAFI--VFTE 386

  Fly   879 AVLSLASDSISWVWAAVAFATFAGFGLA----------------QLCVMWKPISSALGNSTSSVL 927
            ||:.:..   |.|||.:.|......||:                .:...|.|.....|       
Zfish   387 AVIEMPG---SQVWAVLFFVMLFSLGLSSMFGNLEGVLTPLLDLHMVPRWMPKEIFTG------- 441

  Fly   928 LSCVTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTA--QIFGVFLIRGRPYNGDDLVNDL 990
            |.||...|:::.|....|   .|:::........:|::..|  :|..|....|.....||:.   
Zfish   442 LICVVNFLVALIFTLGSG---NYWLEIFNSYVGSVPLLVIAFFEIIAVVCFYGIKRFSDDIE--- 500

  Fly   991 RLCGSM-SAFLALSWNVLLPIGLITLSVVDYKASLSNQFYY--W----------RGKSYFTYWSR 1042
            ::.|.. :.|....|..:.|:.|:.:.|......:.....|  |          ..|.|.| |..
Zfish   501 QMTGRRPNLFWRCCWMGISPVMLLVVLVAYVVVQVQKHPTYPAWNPQYENFPETEEKPYST-WVF 564

  Fly  1043 KMGSLIQIGVLLVIPVTAIIQIYRYLAH 1070
            .:..|:....::.||:.|:.::.|...|
Zfish   565 SICVLLSSVPVISIPIVALYRLIRRHTH 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 113/536 (21%)
slc6a18NP_001108369.1 SLC5-6-like_sbd 12..587 CDD:294310 133/660 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.