Sequence 1: | NP_001261017.1 | Gene: | sli / 36746 | FlyBaseID: | FBgn0264089 | Length: | 2157 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_951020.1 | Gene: | Slitrk1 / 76965 | MGIID: | 2679446 | Length: | 696 | Species: | Mus musculus |
Alignment Length: | 705 | Identity: | 172/705 - (24%) |
---|---|---|---|
Similarity: | 282/705 - (40%) | Gaps: | 201/705 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 66 GVITEARC-PRVCSCT----GLNVDCSHRGLTSVPR--KISADVERLELQGNNLTVIYETDFQRL 123
Fly 124 TKLRMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVG 188
Fly 189 RRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGL---------G 244
Fly 245 RLRAL---------------RLSDNPFACDCHLSWLSRFLRSATRLAPYTR--CQSPSQLKGQNV 292
Fly 293 ADLHDQE------------------------------FKCSGLTEHA------------------ 309
Fly 310 ------PMECGAENS--------CPHPCRC----ADGI-VDCREKSLTSVPVTLP--DDTTELRL 353
Fly 354 EQNFITELPPKSFSSFRRLRRIDLSNNNISRIAH-------------------DALS-----GLK 394
Fly 395 QLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSL-A 458
Fly 459 NGTFDAMKSIKTVHLAKNPFICDCNL----RWLADYLHKNPIETSGARCESPKRMHRRRIESLRE 519
Fly 520 EKFKCSWDELRMKLSGECRMDSDCPAM-CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELG 583
Fly 584 RISSDGLFGRLPHL-------------VKLELKRNQLTGIEPNAFEGASHIQELQ 625 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sli | NP_001261017.1 | LRRNT | 73..103 | CDD:214470 | 12/36 (33%) |
leucine-rich repeat | 83..104 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 102..160 | CDD:290566 | 18/57 (32%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 7/19 (37%) | ||
LRR_RI | <119..259 | CDD:238064 | 41/163 (25%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 149..208 | CDD:290566 | 13/58 (22%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 197..256 | CDD:290566 | 25/82 (30%) | ||
leucine-rich repeat | 198..221 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 10/31 (32%) | ||
leucine-rich repeat | 246..371 | CDD:275380 | 40/210 (19%) | ||
LRRCT | 254..303 | CDD:214507 | 16/80 (20%) | ||
LRRNT | 319..350 | CDD:214470 | 8/37 (22%) | ||
LRR_8 | 349..406 | CDD:290566 | 22/80 (28%) | ||
LRR_4 | 371..411 | CDD:289563 | 17/63 (27%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 13/46 (28%) | ||
leucine-rich repeat | 396..415 | CDD:275380 | 5/18 (28%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 444..465 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 468..480 | CDD:275378 | 4/11 (36%) | ||
LRRCT | 476..525 | CDD:214507 | 14/52 (27%) | ||
leucine-rich repeat | 484..545 | CDD:275380 | 13/64 (20%) | ||
LRRNT | 542..574 | CDD:214470 | 7/32 (22%) | ||
leucine-rich repeat | 552..570 | CDD:275380 | 4/17 (24%) | ||
leucine-rich repeat | 572..596 | CDD:275380 | 4/23 (17%) | ||
LRR_RI | <574..>678 | CDD:238064 | 14/65 (22%) | ||
LRR_8 | 595..655 | CDD:290566 | 10/44 (23%) | ||
leucine-rich repeat | 597..620 | CDD:275380 | 5/35 (14%) | ||
leucine-rich repeat | 621..644 | CDD:275380 | 3/5 (60%) | ||
leucine-rich repeat | 645..668 | CDD:275380 | |||
leucine-rich repeat | 669..756 | CDD:275380 | |||
LRRCT | 677..726 | CDD:214507 | |||
LRRNT | 739..770 | CDD:214470 | |||
leucine-rich repeat | 757..791 | CDD:275380 | |||
LRR_4 | 770..807 | CDD:289563 | |||
LRR_8 | 790..850 | CDD:290566 | |||
LRR_4 | 791..830 | CDD:289563 | |||
leucine-rich repeat | 792..815 | CDD:275380 | |||
LRR_4 | 814..863 | CDD:289563 | |||
leucine-rich repeat | 816..839 | CDD:275380 | |||
leucine-rich repeat | 840..861 | CDD:275380 | |||
LRRCT | 872..920 | CDD:214507 | |||
EGF | 935..966 | CDD:278437 | |||
EGF_CA | 971..1007 | CDD:238011 | |||
EGF_CA | 1009..1045 | CDD:238011 | |||
EGF_CA | 1055..1086 | CDD:238011 | |||
EGF_CA | 1088..1124 | CDD:238011 | |||
Laminin_G_1 | 1204..1335 | CDD:278483 | |||
CT | 1435..1504 | CDD:214482 | |||
Slitrk1 | NP_951020.1 | leucine-rich repeat | 39..60 | CDD:275380 | 7/20 (35%) |
LRR 1 | 59..80 | 7/20 (35%) | |||
leucine-rich repeat | 62..83 | CDD:275380 | 7/20 (35%) | ||
LRR 2 | 83..104 | 5/20 (25%) | |||
leucine-rich repeat | 84..107 | CDD:275380 | 6/22 (27%) | ||
LRR 3 | 106..128 | 7/45 (16%) | |||
LRR_8 | 108..166 | CDD:290566 | 23/81 (28%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 8/46 (17%) | ||
LRR 4 | 131..152 | 8/20 (40%) | |||
leucine-rich repeat | 132..155 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 155..213 | CDD:290566 | 15/57 (26%) | ||
LRR 5 | 155..176 | 10/20 (50%) | |||
leucine-rich repeat | 156..177 | CDD:275380 | 10/20 (50%) | ||
LRR 6 | 178..199 | 3/20 (15%) | |||
TPKR_C2 | 212..>250 | CDD:301599 | 12/37 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 268..317 | 6/48 (13%) | |||
leucine-rich repeat | 356..372 | CDD:275380 | 2/15 (13%) | ||
LRR 7 | 376..397 | 6/20 (30%) | |||
leucine-rich repeat | 377..400 | CDD:275380 | 6/22 (27%) | ||
LRR 8 | 400..421 | 8/20 (40%) | |||
leucine-rich repeat | 401..424 | CDD:275380 | 8/22 (36%) | ||
LRR 9 | 424..445 | 3/20 (15%) | |||
LRR_8 | 425..483 | CDD:290566 | 16/57 (28%) | ||
leucine-rich repeat | 425..448 | CDD:275380 | 5/22 (23%) | ||
LRR 10 | 448..469 | 6/20 (30%) | |||
leucine-rich repeat | 449..472 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 471..530 | CDD:290566 | 20/59 (34%) | ||
LRR 11 | 472..493 | 7/20 (35%) | |||
leucine-rich repeat | 473..495 | CDD:275380 | 7/22 (32%) | ||
LRR 12 | 495..516 | 9/20 (45%) | |||
leucine-rich repeat | 496..520 | CDD:275380 | 9/23 (39%) | ||
TPKR_C2 | 529..579 | CDD:301599 | 15/54 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |