Sequence 1: | NP_001261017.1 | Gene: | sli / 36746 | FlyBaseID: | FBgn0264089 | Length: | 2157 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_075358.1 | Gene: | Rtn4r / 65079 | MGIID: | 2136886 | Length: | 473 | Species: | Mus musculus |
Alignment Length: | 562 | Identity: | 124/562 - (22%) |
---|---|---|---|
Similarity: | 177/562 - (31%) | Gaps: | 205/562 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 CPRVCSCTG---LNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDN 134
Fly 135 QIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNV-ITTVGRRVFKGAQSL 198
Fly 199 RSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLS 263
Fly 264 WLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHPCRCADG 328
Fly 329 IVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGL 393
Fly 394 KQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLA 458
Fly 459 NGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKFK 523
Fly 524 -CS--------------WDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLK--EIPRDIPLH 571
Fly 572 TTELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEP 612 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sli | NP_001261017.1 | LRRNT | 73..103 | CDD:214470 | 11/32 (34%) |
leucine-rich repeat | 83..104 | CDD:275380 | 7/20 (35%) | ||
LRR_8 | 102..160 | CDD:290566 | 15/57 (26%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 5/19 (26%) | ||
LRR_RI | <119..259 | CDD:238064 | 38/140 (27%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 149..208 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 197..256 | CDD:290566 | 20/58 (34%) | ||
leucine-rich repeat | 198..221 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 246..371 | CDD:275380 | 0/124 (0%) | ||
LRRCT | 254..303 | CDD:214507 | 0/48 (0%) | ||
LRRNT | 319..350 | CDD:214470 | 0/30 (0%) | ||
LRR_8 | 349..406 | CDD:290566 | 6/56 (11%) | ||
LRR_4 | 371..411 | CDD:289563 | 7/39 (18%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 396..415 | CDD:275380 | 8/18 (44%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 444..465 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 468..480 | CDD:275378 | 3/11 (27%) | ||
LRRCT | 476..525 | CDD:214507 | 15/49 (31%) | ||
leucine-rich repeat | 484..545 | CDD:275380 | 16/75 (21%) | ||
LRRNT | 542..574 | CDD:214470 | 8/33 (24%) | ||
leucine-rich repeat | 552..570 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 572..596 | CDD:275380 | 7/24 (29%) | ||
LRR_RI | <574..>678 | CDD:238064 | 12/40 (30%) | ||
LRR_8 | 595..655 | CDD:290566 | 5/18 (28%) | ||
leucine-rich repeat | 597..620 | CDD:275380 | 4/16 (25%) | ||
leucine-rich repeat | 621..644 | CDD:275380 | |||
leucine-rich repeat | 645..668 | CDD:275380 | |||
leucine-rich repeat | 669..756 | CDD:275380 | |||
LRRCT | 677..726 | CDD:214507 | |||
LRRNT | 739..770 | CDD:214470 | |||
leucine-rich repeat | 757..791 | CDD:275380 | |||
LRR_4 | 770..807 | CDD:289563 | |||
LRR_8 | 790..850 | CDD:290566 | |||
LRR_4 | 791..830 | CDD:289563 | |||
leucine-rich repeat | 792..815 | CDD:275380 | |||
LRR_4 | 814..863 | CDD:289563 | |||
leucine-rich repeat | 816..839 | CDD:275380 | |||
leucine-rich repeat | 840..861 | CDD:275380 | |||
LRRCT | 872..920 | CDD:214507 | |||
EGF | 935..966 | CDD:278437 | |||
EGF_CA | 971..1007 | CDD:238011 | |||
EGF_CA | 1009..1045 | CDD:238011 | |||
EGF_CA | 1055..1086 | CDD:238011 | |||
EGF_CA | 1088..1124 | CDD:238011 | |||
Laminin_G_1 | 1204..1335 | CDD:278483 | |||
CT | 1435..1504 | CDD:214482 | |||
Rtn4r | NP_075358.1 | LRR 1 | 58..79 | 5/20 (25%) | |
LRR_8 | 60..115 | CDD:290566 | 18/78 (23%) | ||
leucine-rich repeat | 60..82 | CDD:275380 | 6/21 (29%) | ||
LRR 2 | 82..103 | 6/20 (30%) | |||
leucine-rich repeat | 83..106 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | <90..>166 | CDD:238064 | 25/99 (25%) | ||
LRR 3 | 106..128 | 8/45 (18%) | |||
leucine-rich repeat | 107..131 | CDD:275380 | 9/47 (19%) | ||
LRR_8 | 131..190 | CDD:290566 | 26/208 (13%) | ||
LRR 4 | 131..152 | 6/20 (30%) | |||
leucine-rich repeat | 132..155 | CDD:275380 | 8/22 (36%) | ||
LRR 5 | 155..176 | 10/20 (50%) | |||
LRR_4 | 156..195 | CDD:289563 | 19/188 (10%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 12/172 (7%) | ||
LRR_8 | 179..238 | CDD:290566 | 26/58 (45%) | ||
LRR 6 | 179..200 | 9/20 (45%) | |||
leucine-rich repeat | 180..203 | CDD:275380 | 11/22 (50%) | ||
LRR 7 | 203..224 | 8/20 (40%) | |||
leucine-rich repeat | 204..227 | CDD:275380 | 10/22 (45%) | ||
LRR 8 | 227..248 | 6/20 (30%) | |||
leucine-rich repeat | 228..251 | CDD:275380 | 6/22 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 346..446 | 19/69 (28%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |