Sequence 1: | NP_001261017.1 | Gene: | sli / 36746 | FlyBaseID: | FBgn0264089 | Length: | 2157 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017454764.1 | Gene: | Slit2 / 360272 | RGDID: | 69310 | Length: | 1542 | Species: | Rattus norvegicus |
Alignment Length: | 1526 | Identity: | 680/1526 - (44%) |
---|---|---|---|
Similarity: | 947/1526 - (62%) | Gaps: | 111/1526 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 CPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQIH 137
Fly 138 TIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRSLQ 202
Fly 203 LDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFACDCHLSWLSR 267
Fly 268 FLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTE-H----APMECGAENSCPHPCRCAD 327
Fly 328 GIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSG 392
Fly 393 LKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSL 457
Fly 458 ANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIESLREEKF 522
Fly 523 KCS---------WDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLN 578
Fly 579 DNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLH 643
Fly 644 QLKT------------------------LNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 684
Fly 685 LAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSE-GCLGDGYCPPSCTCTGT 748
Fly 749 VVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRHLRSLTRLDLSNNQITILSNYTFANL 813
Fly 814 TKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDC 878
Fly 879 GLKWFSDWIKLDYVEPGIARCAEPEQMKDKLILSTPSSSFVCRGRVRNDILAKCNACFEQPCQNQ 943
Fly 944 AQCVALPQREYQCLCQPGYHGKHCEFMIDACYGNPCRNNATCTVLEEGR---FSCQCAPGYTGAR 1005
Fly 1006 CETNIDDCLGEIKCQNNATCIDGVESYKCECQPGFS---------GEFCDTKIQFCSPEFNPCAN 1061
Fly 1062 GAKCMDHFTHYSCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGH 1126
Fly 1127 NMISMMYPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWCEYLTSISFVHNNSFVELEP 1191
Fly 1192 LRTRPEANVTIVFSSAEQNGILMYDGQDAHLAVELFNGRIRVSYDVGNHPVSTMYSFEMVADGKY 1256
Fly 1257 HAVELLAIKKNFTLRVDRGLARSIINEGSNDYLKLTTPMFLGGLPVDPAQQAYKNWQIRNLTSFK 1321
Fly 1322 GCMKEVWINHKLVDFGNAQRQQKITPGC------ALLEGEQQEEEDD------EQDFMDETPHIK 1374
Fly 1375 EEPVDPCLENKCRRGSRCVPNSNARDGYQCKCKHGQRGRYCDQGEGSTEP--------------- 1424
Fly 1425 ---PTVTAAS-----------TCRKEQVREYYTEND----CRSRQPLKYAKCVGGC-GNQCCAAK 1470
Fly 1471 IVRRRKVRMVCSNNRKYIKNLDIVRKCGCTK 1501 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sli | NP_001261017.1 | LRRNT | 73..103 | CDD:214470 | 15/29 (52%) |
leucine-rich repeat | 83..104 | CDD:275380 | 9/20 (45%) | ||
LRR_8 | 102..160 | CDD:290566 | 36/57 (63%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 11/19 (58%) | ||
LRR_RI | <119..259 | CDD:238064 | 69/139 (50%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 15/22 (68%) | ||
LRR_8 | 149..208 | CDD:290566 | 28/58 (48%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 197..256 | CDD:290566 | 28/58 (48%) | ||
leucine-rich repeat | 198..221 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 12/22 (55%) | ||
leucine-rich repeat | 246..371 | CDD:275380 | 62/129 (48%) | ||
LRRCT | 254..303 | CDD:214507 | 24/48 (50%) | ||
LRRNT | 319..350 | CDD:214470 | 15/30 (50%) | ||
LRR_8 | 349..406 | CDD:290566 | 34/56 (61%) | ||
LRR_4 | 371..411 | CDD:289563 | 25/39 (64%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 15/22 (68%) | ||
leucine-rich repeat | 396..415 | CDD:275380 | 11/18 (61%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 17/22 (77%) | ||
leucine-rich repeat | 444..465 | CDD:275380 | 13/20 (65%) | ||
leucine-rich repeat | 468..480 | CDD:275378 | 8/11 (73%) | ||
LRRCT | 476..525 | CDD:214507 | 32/48 (67%) | ||
leucine-rich repeat | 484..545 | CDD:275380 | 35/69 (51%) | ||
LRRNT | 542..574 | CDD:214470 | 17/31 (55%) | ||
leucine-rich repeat | 552..570 | CDD:275380 | 9/17 (53%) | ||
leucine-rich repeat | 572..596 | CDD:275380 | 10/23 (43%) | ||
LRR_RI | <574..>678 | CDD:238064 | 51/127 (40%) | ||
LRR_8 | 595..655 | CDD:290566 | 30/83 (36%) | ||
leucine-rich repeat | 597..620 | CDD:275380 | 12/22 (55%) | ||
leucine-rich repeat | 621..644 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 645..668 | CDD:275380 | 15/46 (33%) | ||
leucine-rich repeat | 669..756 | CDD:275380 | 41/87 (47%) | ||
LRRCT | 677..726 | CDD:214507 | 23/48 (48%) | ||
LRRNT | 739..770 | CDD:214470 | 17/30 (57%) | ||
leucine-rich repeat | 757..791 | CDD:275380 | 12/33 (36%) | ||
LRR_4 | 770..807 | CDD:289563 | 15/36 (42%) | ||
LRR_8 | 790..850 | CDD:290566 | 33/59 (56%) | ||
LRR_4 | 791..830 | CDD:289563 | 23/38 (61%) | ||
leucine-rich repeat | 792..815 | CDD:275380 | 13/22 (59%) | ||
LRR_4 | 814..863 | CDD:289563 | 28/48 (58%) | ||
leucine-rich repeat | 816..839 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 840..861 | CDD:275380 | 14/20 (70%) | ||
LRRCT | 872..920 | CDD:214507 | 31/47 (66%) | ||
EGF | 935..966 | CDD:278437 | 11/30 (37%) | ||
EGF_CA | 971..1007 | CDD:238011 | 17/38 (45%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 18/44 (41%) | ||
EGF_CA | 1055..1086 | CDD:238011 | 10/30 (33%) | ||
EGF_CA | 1088..1124 | CDD:238011 | 16/35 (46%) | ||
Laminin_G_1 | 1204..1335 | CDD:278483 | 51/130 (39%) | ||
CT | 1435..1504 | CDD:214482 | 23/72 (32%) | ||
Slit2 | XP_017454764.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I11669 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4237 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H3516 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D20003at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001593 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_103623 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.680 |