DRSC/TRiP Functional Genomics Resources

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Protein Alignment sli and CG14762

DIOPT Version :9

Sequence 1:NP_001261017.1 Gene:sli / 36746 FlyBaseID:FBgn0264089 Length:2157 Species:Drosophila melanogaster
Sequence 2:NP_001246198.1 Gene:CG14762 / 35768 FlyBaseID:FBgn0033250 Length:498 Species:Drosophila melanogaster


Alignment Length:713 Identity:149/713 - (20%)
Similarity:234/713 - (32%) Gaps:289/713 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 CPR-----VCSCT----GLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRM 128
            ||.     .|.||    ||::.|....|..:.:.:..      |:|.:..:.|            
  Fly    39 CPEQSEIAPCICTVKKNGLDILCETTDLAHITKSMGT------LKGKSPIIFY------------ 85

  Fly   129 LQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTS-SASLLRLDISNNVITTVGRRVF 192
            |:|..|.:..::...|..| .:..|.::|:.|.||.||.::| .|.|.:||:|.|.:.||..:..
  Fly    86 LKLRHNNLPKLQGFVFLAL-DIRHLTIHNSSLAAIEENALSSLGAGLTQLDVSLNQMKTVPSQAL 149

  Fly   193 KGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRLRALRLSDNPFA 257
            :....|..|.|::|:||.:..:||:||..||||||..|.:|.:....|.|               
  Fly   150 QHLFHLLILNLNHNKITVIHNNAFEGLETLEILTLYENKITQIDPEAFRG--------------- 199

  Fly   258 CDCHLSWLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTEHAPMECGAENSCPHP 322
                                                                             
  Fly   200 ----------------------------------------------------------------- 199

  Fly   323 CRCADGIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAH 387
                                 |.|....|.|..|.:|.:|.|:.|....|:::::..|.|..|:.
  Fly   200 ---------------------LEDHIKRLNLGGNDLTNIPQKALSILSTLKKLEIQENKIRTISE 243

  Fly   388 DALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDL-HSLSLLSLYD 451
            ....||:.|.:|:|..|.|..:|:.||..|..|..|.|..|:||.|.||||:.| .:|..|.|.|
  Fly   244 GDFEGLQSLDSLILAHNMITTVPANVFSHLTLLNSLELEGNKISVIDKDAFKGLEENLQYLRLGD 308

  Fly   452 NNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGARCESPKRMHRRRIES 516
            |.|.::.:                                                       |:
  Fly   309 NQIHTIPS-------------------------------------------------------EA 318

  Fly   517 LREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNE 581
            ||                                                  |||          
  Fly   319 LR--------------------------------------------------PLH---------- 323

  Fly   582 LGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQELQLGENKIKEISNKMFLGLHQL 645
                       ||.|   |:|:.|.:..:..:||.| ...:..|.|.:|.||.:.:.:|..|:.|
  Fly   324 -----------RLRH---LDLRNNNINVLAEDAFTGFGDSLTFLNLQKNDIKVLPSLLFENLNSL 374

  Fly   646 KTLNLYDNQISCVMPGSFEH-LNSLTSLNLASNPFNCNCHLAWFAEWL------------RKKSL 697
            :||||.:|::..:.....|. :::|..:::..||.||:|.|.||.:.|            :||.|
  Fly   375 ETLNLQNNKLQRIPQDIMEPVIDTLRIIDITDNPLNCSCELTWFPKLLEDLKNKDDEMSQKKKPL 439

  Fly   698 NGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEGCLGDGYCPPSCTCTGTVVRCSRNQLKEI 760
                  |......|:..::.:|..:..|:..|         ..||.|..|.:.....|.|.:|
  Fly   440 ------CHMSLDNREYFVQAMPTEKMHCAGLN---------VSPSPTSGGLMRILQVNILAQI 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sliNP_001261017.1 LRRNT 73..103 CDD:214470 9/38 (24%)
leucine-rich repeat 83..104 CDD:275380 2/20 (10%)
LRR_8 102..160 CDD:290566 10/57 (18%)
leucine-rich repeat 105..125 CDD:275380 3/19 (16%)
LRR_RI <119..259 CDD:238064 41/140 (29%)
leucine-rich repeat 126..149 CDD:275380 5/22 (23%)
LRR_8 149..208 CDD:290566 20/59 (34%)
leucine-rich repeat 150..173 CDD:275380 8/23 (35%)
leucine-rich repeat 174..197 CDD:275380 7/22 (32%)
LRR_8 197..256 CDD:290566 20/58 (34%)
leucine-rich repeat 198..221 CDD:275380 10/22 (45%)
leucine-rich repeat 222..245 CDD:275380 10/22 (45%)
leucine-rich repeat 246..371 CDD:275380 9/124 (7%)
LRRCT 254..303 CDD:214507 0/48 (0%)
LRRNT 319..350 CDD:214470 2/30 (7%)
LRR_8 349..406 CDD:290566 17/56 (30%)
LRR_4 371..411 CDD:289563 11/39 (28%)
leucine-rich repeat 372..395 CDD:275380 6/22 (27%)
leucine-rich repeat 396..415 CDD:275380 7/18 (39%)
leucine-rich repeat 420..443 CDD:275380 12/23 (52%)
leucine-rich repeat 444..465 CDD:275380 6/20 (30%)
leucine-rich repeat 468..480 CDD:275378 0/11 (0%)
LRRCT 476..525 CDD:214507 3/48 (6%)
leucine-rich repeat 484..545 CDD:275380 3/60 (5%)
LRRNT 542..574 CDD:214470 3/31 (10%)
leucine-rich repeat 552..570 CDD:275380 0/17 (0%)
leucine-rich repeat 572..596 CDD:275380 2/23 (9%)
LRR_RI <574..>678 CDD:238064 24/105 (23%)
LRR_8 595..655 CDD:290566 20/60 (33%)
leucine-rich repeat 597..620 CDD:275380 6/23 (26%)
leucine-rich repeat 621..644 CDD:275380 7/22 (32%)
leucine-rich repeat 645..668 CDD:275380 7/23 (30%)
leucine-rich repeat 669..756 CDD:275380 22/98 (22%)
LRRCT 677..726 CDD:214507 15/60 (25%)
LRRNT 739..770 CDD:214470 7/22 (32%)
leucine-rich repeat 757..791 CDD:275380 2/4 (50%)
LRR_4 770..807 CDD:289563
LRR_8 790..850 CDD:290566
LRR_4 791..830 CDD:289563
leucine-rich repeat 792..815 CDD:275380
LRR_4 814..863 CDD:289563
leucine-rich repeat 816..839 CDD:275380
leucine-rich repeat 840..861 CDD:275380
LRRCT 872..920 CDD:214507
EGF 935..966 CDD:278437
EGF_CA 971..1007 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1055..1086 CDD:238011
EGF_CA 1088..1124 CDD:238011
Laminin_G_1 1204..1335 CDD:278483
CT 1435..1504 CDD:214482
CG14762NP_001246198.1 leucine-rich repeat 85..105 CDD:275380 6/32 (19%)
LRR_RI 93..384 CDD:238064 108/521 (21%)
leucine-rich repeat 107..129 CDD:275380 8/21 (38%)
leucine-rich repeat 131..154 CDD:275380 7/22 (32%)
LRR_8 154..214 CDD:290566 25/160 (16%)
leucine-rich repeat 155..178 CDD:275380 10/22 (45%)
leucine-rich repeat 179..203 CDD:275380 11/124 (9%)
leucine-rich repeat 204..227 CDD:275380 7/22 (32%)
LRR_8 226..286 CDD:290566 19/59 (32%)
leucine-rich repeat 228..251 CDD:275380 6/22 (27%)
leucine-rich repeat 252..275 CDD:275380 9/22 (41%)
LRR_8 276..335 CDD:290566 30/187 (16%)
leucine-rich repeat 276..300 CDD:275380 12/23 (52%)
leucine-rich repeat 301..324 CDD:275380 12/148 (8%)
leucine-rich repeat 325..349 CDD:275380 8/26 (31%)
LRR_8 349..409 CDD:290566 16/59 (27%)
leucine-rich repeat 350..373 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443105
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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