Sequence 1: | NP_001261017.1 | Gene: | sli / 36746 | FlyBaseID: | FBgn0264089 | Length: | 2157 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780708.1 | Gene: | Slitrk6 / 239250 | MGIID: | 2443198 | Length: | 840 | Species: | Mus musculus |
Alignment Length: | 970 | Identity: | 216/970 - (22%) |
---|---|---|---|
Similarity: | 339/970 - (34%) | Gaps: | 302/970 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 CPRVCSCTG----LNVDCSHRGLTSVPRKISADVER---LELQGNNLTVIYETDFQRLTKLRMLQ 130
Fly 131 LTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGA 195
Fly 196 QSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIF-----------GG------- 242
Fly 243 ------LGRLRALRLSDNPFACDCHLSWLSRFLRS----------------------ATRLAPYT 279
Fly 280 RCQSP----------------------SQLKGQNVADLHDQEFKCSGLTEH--APMECGAENSCP 320
Fly 321 HPCRC-----ADGIVDCREKSLTSV-----PVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRI 375
Fly 376 DLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRD 440
Fly 441 LHSLSLLSLYDNNIQSL------------------------ANGTFDAMKSIKTVHLAKNPFICD 481
Fly 482 CNLRWLADYLHK--NPIETSGARCESPKRMHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCP 544
Fly 545 AMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG 609
Fly 610 IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL 674
Fly 675 ASNPFNCNCHLAWFA-----EWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEF--KCSSENSEG 732
Fly 733 CLGDGYCPPSCT-----CTGTVVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRHL-RS 791
Fly 792 LTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLS----LHGNRISM 852
Fly 853 LPE------GSFEDLKSLTHIALGSNPLYCDCGLKWFSDWIKLDYVEPGIARCAEPEQMK 906 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sli | NP_001261017.1 | LRRNT | 73..103 | CDD:214470 | 7/33 (21%) |
leucine-rich repeat | 83..104 | CDD:275380 | 4/20 (20%) | ||
LRR_8 | 102..160 | CDD:290566 | 21/60 (35%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 8/19 (42%) | ||
LRR_RI | <119..259 | CDD:238064 | 49/163 (30%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 149..208 | CDD:290566 | 14/58 (24%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 2/22 (9%) | ||
LRR_8 | 197..256 | CDD:290566 | 29/82 (35%) | ||
leucine-rich repeat | 198..221 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 12/46 (26%) | ||
leucine-rich repeat | 246..371 | CDD:275380 | 38/180 (21%) | ||
LRRCT | 254..303 | CDD:214507 | 17/92 (18%) | ||
LRRNT | 319..350 | CDD:214470 | 10/40 (25%) | ||
LRR_8 | 349..406 | CDD:290566 | 16/56 (29%) | ||
LRR_4 | 371..411 | CDD:289563 | 12/39 (31%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 396..415 | CDD:275380 | 7/18 (39%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 444..465 | CDD:275380 | 7/44 (16%) | ||
leucine-rich repeat | 468..480 | CDD:275378 | 3/11 (27%) | ||
LRRCT | 476..525 | CDD:214507 | 13/50 (26%) | ||
leucine-rich repeat | 484..545 | CDD:275380 | 11/62 (18%) | ||
LRRNT | 542..574 | CDD:214470 | 7/31 (23%) | ||
leucine-rich repeat | 552..570 | CDD:275380 | 3/17 (18%) | ||
leucine-rich repeat | 572..596 | CDD:275380 | 5/23 (22%) | ||
LRR_RI | <574..>678 | CDD:238064 | 11/103 (11%) | ||
LRR_8 | 595..655 | CDD:290566 | 6/59 (10%) | ||
leucine-rich repeat | 597..620 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 621..644 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 645..668 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 669..756 | CDD:275380 | 14/98 (14%) | ||
LRRCT | 677..726 | CDD:214507 | 9/55 (16%) | ||
LRRNT | 739..770 | CDD:214470 | 6/35 (17%) | ||
leucine-rich repeat | 757..791 | CDD:275380 | 8/34 (24%) | ||
LRR_4 | 770..807 | CDD:289563 | 11/37 (30%) | ||
LRR_8 | 790..850 | CDD:290566 | 19/63 (30%) | ||
LRR_4 | 791..830 | CDD:289563 | 11/38 (29%) | ||
leucine-rich repeat | 792..815 | CDD:275380 | 5/22 (23%) | ||
LRR_4 | 814..863 | CDD:289563 | 17/58 (29%) | ||
leucine-rich repeat | 816..839 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 840..861 | CDD:275380 | 8/30 (27%) | ||
LRRCT | 872..920 | CDD:214507 | 8/35 (23%) | ||
EGF | 935..966 | CDD:278437 | |||
EGF_CA | 971..1007 | CDD:238011 | |||
EGF_CA | 1009..1045 | CDD:238011 | |||
EGF_CA | 1055..1086 | CDD:238011 | |||
EGF_CA | 1088..1124 | CDD:238011 | |||
Laminin_G_1 | 1204..1335 | CDD:278483 | |||
CT | 1435..1504 | CDD:214482 | |||
Slitrk6 | NP_780708.1 | leucine-rich repeat | 68..89 | CDD:275380 | 8/20 (40%) |
LRR_8 | 69..124 | CDD:290566 | 20/54 (37%) | ||
LRR 1 | 89..110 | 6/20 (30%) | |||
leucine-rich repeat | 94..113 | CDD:275380 | 7/18 (39%) | ||
LRR 2 | 113..134 | 7/44 (16%) | |||
LRR_8 | 114..172 | CDD:290566 | 24/81 (30%) | ||
leucine-rich repeat | 114..137 | CDD:275380 | 8/46 (17%) | ||
LRR 3 | 137..158 | 10/20 (50%) | |||
leucine-rich repeat | 138..161 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 161..219 | CDD:290566 | 17/57 (30%) | ||
LRR 4 | 161..182 | 11/20 (55%) | |||
leucine-rich repeat | 162..177 | CDD:275380 | 7/14 (50%) | ||
LRR 5 | 184..205 | 1/20 (5%) | |||
leucine-rich repeat | 185..260 | CDD:275380 | 13/74 (18%) | ||
leucine-rich repeat | 210..222 | CDD:275378 | 4/11 (36%) | ||
TPKR_C2 | 218..268 | CDD:301599 | 9/49 (18%) | ||
leucine-rich repeat | 261..411 | CDD:275380 | 33/153 (22%) | ||
LRR 6 | 363..384 | 5/20 (25%) | |||
leucine-rich repeat | 365..387 | CDD:275380 | 5/21 (24%) | ||
LRR_8 | 387..444 | CDD:290566 | 20/56 (36%) | ||
LRR 7 | 387..408 | 5/20 (25%) | |||
LRR_4 | 388..426 | CDD:289563 | 11/37 (30%) | ||
LRR_4 | 410..449 | CDD:289563 | 15/38 (39%) | ||
LRR 8 | 411..432 | 8/20 (40%) | |||
leucine-rich repeat | 412..435 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 435..493 | CDD:290566 | 13/57 (23%) | ||
LRR 9 | 435..456 | 7/20 (35%) | |||
leucine-rich repeat | 436..459 | CDD:275380 | 6/22 (27%) | ||
LRR 10 | 459..480 | 6/20 (30%) | |||
leucine-rich repeat | 460..481 | CDD:275380 | 6/20 (30%) | ||
LRR 11 | 482..503 | 0/20 (0%) | |||
LRRCT | 516..566 | CDD:214507 | 14/69 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 717..736 | 7/20 (35%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |