DRSC/TRiP Functional Genomics Resources

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Protein Alignment sli and slt-1

DIOPT Version :9

Sequence 1:NP_001261017.1 Gene:sli / 36746 FlyBaseID:FBgn0264089 Length:2157 Species:Drosophila melanogaster
Sequence 2:NP_510437.2 Gene:slt-1 / 181562 WormBaseID:WBGene00004854 Length:1410 Species:Caenorhabditis elegans


Alignment Length:1440 Identity:585/1440 - (40%)
Similarity:812/1440 - (56%) Gaps:65/1440 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ARCPRVCSCTGLNVDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQRLTKLRMLQLTDNQ 135
            |.||..|.|....|.|..:.||.||:.|..|..||:||.|.:|.|...||..|..|:.|||.|||
 Worm    15 ATCPAECVCVDRTVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQ 79

  Fly   136 IHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITTVGRRVFKGAQSLRS 200
            |.||...||..||.|::|||:.||::.:|:|...::..|..||:|.|.||.|.....:|.:.|..
 Worm    80 IVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEV 144

  Fly   201 LQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSL--PHNIFGGLGRLRALRLSDNPFACDCHLS 263
            |.||.|.|.||:.:.....|.||:||||.|.||:.  |.|     .|.|.|.|.:||:.|||.|.
 Worm   145 LNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTTFEEPSN-----ARFRQLDLFNNPWNCDCRLR 204

  Fly   264 WLSRFLRSATRLAPYTRCQSPSQLKGQNVADLHDQEFKCSGLTEHA-PMECGAENSCPHPCRCAD 327
            |:.::|..|.. ...|.|.:|..|:|.::..|.|:...|||..:.. ...|.....||.||.|..
 Worm   205 WMRKWLEKAEG-QNKTVCATPLNLQGSSIEILQDKFMTCSGNRKRRYKKTCETAEICPLPCTCTG 268

  Fly   328 GIVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSG 392
            ..||||:..||.||..||..|||:|||||.|:.:|..||.:.:.|.|:|||.|.|:.|...|..|
 Worm   269 TTVDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLG 333

  Fly   393 LKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSL 457
            |..|.|||||||.|.||.|..|:|||||||||||||:::|||:..|..:..||:||||||:|:|:
 Worm   334 LHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSI 398

  Fly   458 ANGTFDAMKSIKTVHLAKNPFICDCNLRWLADY-LHKNPIETSGARCESPKRMHRRRIESLREEK 521
            :..||..:.|:.|:||||||.||||||:|||.. |.|| |||||||||.|||:.:::..:|...|
 Worm   399 SEVTFQNLTSLSTLHLAKNPLICDCNLQWLAQINLQKN-IETSGARCEQPKRLRKKKFATLPPNK 462

  Fly   522 FKCSWDELRMKL-SGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRI 585
            |||...|..:.: :..|.:||.||..|.|.||||||..|||..||..||...|:|||:.|.:..:
 Worm   463 FKCKGSESFVSMYADSCFIDSICPTQCDCYGTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTV 527

  Fly   586 SSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 650
            ..:.....|.:|..|:|..|.:|.|...:||..|.::||:|.:||:...|:.:......|:.|:|
 Worm   528 DLNSNIHVLENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDL 592

  Fly   651 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNG-GAARCGAPSKVRDVQ 714
            ..|.|.|.....|.....:..:.:..|...|:|.:.....|||..|.:. ....|      :..|
 Worm   593 SGNNIQCFSSIFFNKATRIREIKVIGNDLLCDCRILPLMSWLRSNSSHSIDIPPC------QQFQ 651

  Fly   715 IKDLPHSEFKCSSENSEGCLGD-GYCPPSCTCTGTVVRCSRNQLKEIPRGIPAETSELYLESNEI 778
            ..|....:.:|::...|.|..| ..|||.|:|...|||||...|...|..||.:|:||||::|.|
 Worm   652 YSDNESDKQRCAAFPEETCSDDSNLCPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANYI 716

  Fly   779 EQIHYERIRHLRSLTRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVL 843
            .:|....:..|.|||:||||:|::..|.|.||:|||:|||||||||||:|||..|.:|||.||:|
 Worm   717 NEIPAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKLRCLQPLAFNGLNALRIL 781

  Fly   844 SLHGNRISMLPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSDWIKLDYVEPGIARCAEPEQMKDK 908
            |||||.||.||:.:|.:|.|:||||:|||.|||||.:.|||.|||..::|.|||||..|..:.::
 Worm   782 SLHGNDISFLPQSAFSNLTSITHIAVGSNSLYCDCNMAWFSKWIKSKFIEAGIARCEYPNTVSNQ 846

  Fly   909 LILSTPSSSFVCRGRVRNDILAKCNACFEQPCQNQAQCVALPQREYQCLCQPGYHGKHCEFMIDA 973
            |:|:.....|.|..:|...:..||:.|...||:|.|.|.....|:|.|.|.||::|.|||..|||
 Worm   847 LLLTAQPYQFTCDSKVPTKLATKCDLCLNSPCKNNAICETTSSRKYTCNCTPGFYGVHCENQIDA 911

  Fly   974 CYGNPCRNNATCTVLEEGRFSCQCAPGYTGARCETNIDDCLGEIKCQNNATCIDGVESYKCECQP 1038
            |||:||.|||||.|.:.|||:|.|..|:.|..||.|||||:.. ||:|...|:|.:.||:|:|..
 Worm   912 CYGSPCLNNATCKVAQAGRFNCYCNKGFEGDYCEKNIDDCVNS-KCENGGKCVDLINSYRCDCPM 975

  Fly  1039 GFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHYSCDCQAGFHGTNCTDNIDDCQNHMCQNGGTC 1103
            .:.|:.|:.|:::|:.:.|||.|..||:.....|||.|..||.|.||..|||||:|..|||||:|
 Worm   976 EYEGKHCEDKLEYCTKKLNPCENNGKCIPINGSYSCMCSPGFTGNNCETNIDDCKNVECQNGGSC 1040

  Fly  1104 VDGINDYQCRCPDDYTGKYCEGHNMISMMYPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYT 1168
            ||||..|.|.|...|.|:|||...|:.|.|.:|..||...|..|.|. .:...||:.|:||.|::
 Worm  1041 VDGILSYDCLCRPGYAGQYCEIPPMMDMEYQKTDACQQSACGQGECV-ASQNSSDFTCKCHEGFS 1104

  Fly  1169 GKWCEYLTSISFVHNNSFVELEPLRTRPEANVTIVFSSAEQNGILMYDGQDAHLAVELFNGRIRV 1233
            |..|:...|:.|.:..:::.|:||.:  :..:|:...:..:.|||:|.|.|..::.||::||:::
 Worm  1105 GPSCDRQMSVGFKNPGAYLALDPLAS--DGTITMTLRTTSKIGILLYYGDDHFVSAELYDGRVKL 1167

  Fly  1234 SYDVGNHPVSTMYSFEMVADGKYHAVELLAIKKNFTLRVDRGLARSIINEGSNDYL--KLTTPMF 1296
            .|.:||.|.|.|||...|.||..|.:.:...::...|::|:...:.:.|.|.:|.|  |....::
 Worm  1168 VYYIGNFPASHMYSSVKVNDGLPHRISIRTSERKCFLQIDKNPVQIVENSGKSDQLITKGKEMLY 1232

  Fly  1297 LGGLPVDPAQQAYKNWQIRNLTSFKGCMKEVWINHKLVDFGNAQRQQKITPGCALLEGEQQEEED 1361
            :||||::.:|.|.:.:.::|..|.|||:..:.||...::...|.........|:           
 Worm  1233 IGGLPIEKSQDAKRRFHVKNSESLKGCISSITINEVPINLQQALENVNTEQSCS----------- 1286

  Fly  1362 DEQDFMDETPHIKEEPVDPCLENKCRRGSRCVPNSNARDGYQCKCKHGQRGRYCDQGEGSTEPPT 1426
                          ..|:.|....|..| :|..|:.:..||.|:|.....|.:||:         
 Worm  1287 --------------ATVNFCAGIDCGNG-KCTNNALSPKGYMCQCDSHFSGEHCDE--------- 1327

  Fly  1427 VTAASTCRKEQVREYYTENDCRSRQPLKYAKCVGGCGNQ--CCAAKIVRRRKVRMVCSNNRKYIK 1489
              ....|.|::.|.::.||:|||...:|.|:|.|.||.:  ||.|...::|||:|:|.|....|.
 Worm  1328 --KRIKCDKQKFRRHHIENECRSVDRIKIAECNGYCGGEQNCCTAVKKKQRKVKMICKNGTTKIS 1390

  Fly  1490 NLDIVRKCGC 1499
            .:.|:|:|.|
 Worm  1391 TVHIIRQCQC 1400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sliNP_001261017.1 LRRNT 73..103 CDD:214470 12/29 (41%)
leucine-rich repeat 83..104 CDD:275380 8/20 (40%)
LRR_8 102..160 CDD:290566 29/57 (51%)
leucine-rich repeat 105..125 CDD:275380 9/19 (47%)
LRR_RI <119..259 CDD:238064 60/141 (43%)
leucine-rich repeat 126..149 CDD:275380 13/22 (59%)
LRR_8 149..208 CDD:290566 22/58 (38%)
leucine-rich repeat 150..173 CDD:275380 8/22 (36%)
leucine-rich repeat 174..197 CDD:275380 9/22 (41%)
LRR_8 197..256 CDD:290566 25/60 (42%)
leucine-rich repeat 198..221 CDD:275380 8/22 (36%)
leucine-rich repeat 222..245 CDD:275380 11/24 (46%)
leucine-rich repeat 246..371 CDD:275380 50/125 (40%)
LRRCT 254..303 CDD:214507 16/48 (33%)
LRRNT 319..350 CDD:214470 16/30 (53%)
LRR_8 349..406 CDD:290566 30/56 (54%)
LRR_4 371..411 CDD:289563 22/39 (56%)
leucine-rich repeat 372..395 CDD:275380 11/22 (50%)
leucine-rich repeat 396..415 CDD:275380 12/18 (67%)
leucine-rich repeat 420..443 CDD:275380 13/22 (59%)
leucine-rich repeat 444..465 CDD:275380 12/20 (60%)
leucine-rich repeat 468..480 CDD:275378 7/11 (64%)
LRRCT 476..525 CDD:214507 30/49 (61%)
leucine-rich repeat 484..545 CDD:275380 29/62 (47%)
LRRNT 542..574 CDD:214470 17/31 (55%)
leucine-rich repeat 552..570 CDD:275380 11/17 (65%)
leucine-rich repeat 572..596 CDD:275380 6/23 (26%)
LRR_RI <574..>678 CDD:238064 27/103 (26%)
LRR_8 595..655 CDD:290566 19/59 (32%)
leucine-rich repeat 597..620 CDD:275380 8/22 (36%)
leucine-rich repeat 621..644 CDD:275380 6/22 (27%)
leucine-rich repeat 645..668 CDD:275380 7/22 (32%)
leucine-rich repeat 669..756 CDD:275380 24/88 (27%)
LRRCT 677..726 CDD:214507 10/49 (20%)
LRRNT 739..770 CDD:214470 15/30 (50%)
leucine-rich repeat 757..791 CDD:275380 13/33 (39%)
LRR_4 770..807 CDD:289563 17/36 (47%)
LRR_8 790..850 CDD:290566 41/59 (69%)
LRR_4 791..830 CDD:289563 27/38 (71%)
leucine-rich repeat 792..815 CDD:275380 13/22 (59%)
LRR_4 814..863 CDD:289563 33/48 (69%)
leucine-rich repeat 816..839 CDD:275380 17/22 (77%)
leucine-rich repeat 840..861 CDD:275380 13/20 (65%)
LRRCT 872..920 CDD:214507 22/47 (47%)
EGF 935..966 CDD:278437 13/30 (43%)
EGF_CA 971..1007 CDD:238011 21/35 (60%)
EGF_CA 1009..1045 CDD:238011 15/35 (43%)
EGF_CA 1055..1086 CDD:238011 14/30 (47%)
EGF_CA 1088..1124 CDD:238011 22/35 (63%)
Laminin_G_1 1204..1335 CDD:278483 42/132 (32%)
CT 1435..1504 CDD:214482 27/67 (40%)
slt-1NP_510437.2 LRRNT 17..47 CDD:214470 12/29 (41%)
leucine-rich repeat 26..45 CDD:275380 7/18 (39%)
LRR_RI <48..195 CDD:238064 65/151 (43%)
LRR_8 48..104 CDD:290566 29/55 (53%)
leucine-rich repeat 48..69 CDD:275380 10/20 (50%)
leucine-rich repeat 70..93 CDD:275380 13/22 (59%)
LRR_8 94..152 CDD:290566 22/57 (39%)
leucine-rich repeat 94..117 CDD:275380 8/22 (36%)
leucine-rich repeat 118..165 CDD:275380 17/46 (37%)
LRR_8 142..196 CDD:290566 24/58 (41%)
leucine-rich repeat 142..163 CDD:275380 8/20 (40%)
leucine-rich repeat 166..284 CDD:275380 48/123 (39%)
LRRCT 195..243 CDD:214507 16/48 (33%)
LRRNT 259..291 CDD:214470 16/31 (52%)
leucine-rich repeat 285..312 CDD:275380 14/26 (54%)
LRR_8 287..347 CDD:290566 31/59 (53%)
LRR_4 311..352 CDD:289563 22/40 (55%)
leucine-rich repeat 313..336 CDD:275380 11/22 (50%)
LRR_8 336..419 CDD:290566 49/82 (60%)
leucine-rich repeat 337..384 CDD:275380 30/46 (65%)
leucine-rich repeat 385..408 CDD:275380 12/22 (55%)
LRRCT 417..466 CDD:214507 30/49 (61%)
LRRNT 484..512 CDD:214470 16/27 (59%)
leucine-rich repeat 494..516 CDD:275380 12/21 (57%)
LRR_RI <514..635 CDD:238064 32/120 (27%)
leucine-rich repeat 517..538 CDD:275380 5/20 (25%)
LRR_8 538..597 CDD:290566 19/58 (33%)
leucine-rich repeat 539..562 CDD:275380 8/22 (36%)
leucine-rich repeat 563..586 CDD:275380 6/22 (27%)
leucine-rich repeat 587..610 CDD:275380 7/22 (32%)
leucine-rich repeat 611..675 CDD:275380 14/69 (20%)
leucine-rich repeat 676..729 CDD:275380 23/52 (44%)
LRRNT 677..708 CDD:214470 15/30 (50%)
LRR_8 729..788 CDD:290566 41/58 (71%)
LRR_4 729..771 CDD:289563 29/41 (71%)
leucine-rich repeat 730..753 CDD:275380 13/22 (59%)
leucine-rich repeat 754..777 CDD:275380 17/22 (77%)
leucine-rich repeat 778..799 CDD:275380 13/20 (65%)
EGF_CA 909..945 CDD:238011 21/35 (60%)
EGF_CA 947..983 CDD:238011 15/36 (42%)
EGF_CA <994..1023 CDD:238011 14/28 (50%)
EGF_CA 1025..1061 CDD:238011 22/35 (63%)
LamG 1133..1268 CDD:214598 43/134 (32%)
CT 1334..1405 CDD:214482 27/67 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166763
Domainoid 1 1.000 89 1.000 Domainoid score I4979
eggNOG 1 0.900 - - E2759_KOG4237
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3516
Inparanoid 1 1.050 1124 1.000 Inparanoid score I114
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45950
OrthoDB 1 1.010 - - D20003at33208
OrthoFinder 1 1.000 - - FOG0001593
OrthoInspector 1 1.000 - - oto19502
orthoMCL 1 0.900 - - OOG6_103623
Panther 1 1.100 - - LDO PTHR45836
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3290
SonicParanoid 1 1.000 - - X1145
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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