DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sli and ADGRA3

DIOPT Version :9

Sequence 1:NP_001261017.1 Gene:sli / 36746 FlyBaseID:FBgn0264089 Length:2157 Species:Drosophila melanogaster
Sequence 2:NP_660333.2 Gene:ADGRA3 / 166647 HGNCID:13839 Length:1321 Species:Homo sapiens


Alignment Length:524 Identity:124/524 - (23%)
Similarity:181/524 - (34%) Gaps:159/524 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 CPHPCR---------CADGIVDCREKSLTSV--PVTLPDDTTELRLEQNFITELPPKSFSSFRRL 372
            |.|..|         .|:|.|.|....|..|  |.|||:.|..|.|..|.|:||...|||....|
Human    43 CKHDGRPRGAGRAAGAAEGKVVCSSLELAQVLPPDTLPNRTVTLILSNNKISELKNGSFSGLSLL 107

  Fly   373 RRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEISCIRKDA 437
            .|:||.||.||.|                        ..|.|.||.||:.|.|..|.|.|:..|.
Human   108 ERLDLRNNLISSI------------------------DPGAFWGLSSLKRLDLTNNRIGCLNADI 148

  Fly   438 FRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADYLHKNPIETSGAR 502
            ||.|.:|..|:|..|...||:.||||.:.|::::.......:||||:.|:..::.:..|.....|
Human   149 FRGLTNLVRLNLSGNLFSSLSQGTFDYLASLRSLEFQTEYLLCDCNILWMHRWVKEKNITVRDTR 213

  Fly   503 CESPKRMHRRRIESLREEKFKCSWDELRMKLSGECRMDSDCPAMCHCEGTTVDCTGRGLKEIPRD 567
            |..||.:..:.:..:::|...|                                          |
Human   214 CVYPKSLQAQPVTGVKQELLTC------------------------------------------D 236

  Fly   568 IPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG--------ASHI-QE 623
            .||                      .||........|..:       |||        ||:| |:
Human   237 PPL----------------------ELPSFYMTPSHRQVV-------FEGDSLPFQCMASYIDQD 272

  Fly   624 LQL---GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNL-ASNPFNCNCH 684
            :|:   .:.:|.|......:.:.:    |:..|   |.:..|     :||..|: |.:..|..||
Human   273 MQVLWYQDGRIVETDESQGIFVEK----NMIHN---CSLIAS-----ALTISNIQAGSTGNWGCH 325

  Fly   685 LAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSENSEGCLGDGYCPPSCTCTGTV 749
            :.      .|:..|           .|.|.|..|..|...|..|......||...|.:.......
Human   326 VQ------TKRGNN-----------TRTVDIVVLESSAQYCPPERVVNNKGDFRWPRTLAGITAY 373

  Fly   750 VRCSRN-QLKEIPRGIPAETSELYLESNE---IEQIHYERIRHLRSLTRLDLSNNQITILSNYTF 810
            ::|:|| ....|..|.|.:..:.:...:.   .....|.|.::...:||:....||:.:      
Human   374 LQCTRNTHGSGIYPGNPQDERKAWRRCDRGGFWADDDYSRCQYANDVTRVLYMFNQMPL------ 432

  Fly   811 ANLT 814
             |||
Human   433 -NLT 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sliNP_001261017.1 LRRNT 73..103 CDD:214470
leucine-rich repeat 83..104 CDD:275380
LRR_8 102..160 CDD:290566
leucine-rich repeat 105..125 CDD:275380
LRR_RI <119..259 CDD:238064
leucine-rich repeat 126..149 CDD:275380
LRR_8 149..208 CDD:290566
leucine-rich repeat 150..173 CDD:275380
leucine-rich repeat 174..197 CDD:275380
LRR_8 197..256 CDD:290566
leucine-rich repeat 198..221 CDD:275380
leucine-rich repeat 222..245 CDD:275380
leucine-rich repeat 246..371 CDD:275380 23/62 (37%)
LRRCT 254..303 CDD:214507
LRRNT 319..350 CDD:214470 14/41 (34%)
LRR_8 349..406 CDD:290566 18/56 (32%)
LRR_4 371..411 CDD:289563 9/39 (23%)
leucine-rich repeat 372..395 CDD:275380 9/22 (41%)
leucine-rich repeat 396..415 CDD:275380 1/18 (6%)
leucine-rich repeat 420..443 CDD:275380 10/22 (45%)
leucine-rich repeat 444..465 CDD:275380 10/20 (50%)
leucine-rich repeat 468..480 CDD:275378 0/11 (0%)
LRRCT 476..525 CDD:214507 11/48 (23%)
leucine-rich repeat 484..545 CDD:275380 8/60 (13%)
LRRNT 542..574 CDD:214470 3/31 (10%)
leucine-rich repeat 552..570 CDD:275380 1/17 (6%)
leucine-rich repeat 572..596 CDD:275380 1/23 (4%)
LRR_RI <574..>678 CDD:238064 21/116 (18%)
LRR_8 595..655 CDD:290566 14/71 (20%)
leucine-rich repeat 597..620 CDD:275380 5/30 (17%)
leucine-rich repeat 621..644 CDD:275380 5/26 (19%)
leucine-rich repeat 645..668 CDD:275380 4/22 (18%)
leucine-rich repeat 669..756 CDD:275380 22/88 (25%)
LRRCT 677..726 CDD:214507 10/48 (21%)
LRRNT 739..770 CDD:214470 7/31 (23%)
leucine-rich repeat 757..791 CDD:275380 5/36 (14%)
LRR_4 770..807 CDD:289563 6/39 (15%)
LRR_8 790..850 CDD:290566 7/25 (28%)
LRR_4 791..830 CDD:289563 7/24 (29%)
leucine-rich repeat 792..815 CDD:275380 7/23 (30%)
LRR_4 814..863 CDD:289563 1/1 (100%)
leucine-rich repeat 816..839 CDD:275380
leucine-rich repeat 840..861 CDD:275380
LRRCT 872..920 CDD:214507
EGF 935..966 CDD:278437
EGF_CA 971..1007 CDD:238011
EGF_CA 1009..1045 CDD:238011
EGF_CA 1055..1086 CDD:238011
EGF_CA 1088..1124 CDD:238011
Laminin_G_1 1204..1335 CDD:278483
CT 1435..1504 CDD:214482
ADGRA3NP_660333.2 LRR_RI <70..>182 CDD:238064 51/135 (38%)
LRR 1 82..103 9/20 (45%)
leucine-rich repeat 83..106 CDD:275378 10/22 (45%)
LRR_8 85..141 CDD:290566 27/79 (34%)
LRR 2 106..127 11/44 (25%)
LRR_4 107..146 CDD:289563 20/62 (32%)
leucine-rich repeat 107..130 CDD:275378 13/46 (28%)
LRR_8 129..182 CDD:290566 22/52 (42%)
LRR 3 130..151 9/20 (45%)
leucine-rich repeat 131..154 CDD:275378 10/22 (45%)
LRR 4 154..175 9/20 (45%)
leucine-rich repeat 155..178 CDD:275378 10/22 (45%)
LRRCT 189..>223 CDD:214507 10/33 (30%)
IG_like 249..341 CDD:214653 27/127 (21%)
Ig 262..337 CDD:143165 21/103 (20%)
HRM <363..416 CDD:280888 9/52 (17%)
LRR 5 594..620
GPS 704..743 CDD:280071
7tm_4 796..>945 CDD:304433
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1073..1094
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1198..1219
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1231..1265
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1294..1321
PDZ-binding. /evidence=ECO:0000255 1319..1321
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4237
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.