DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and ARN1

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_011823.1 Gene:ARN1 / 856345 SGDID:S000001032 Length:627 Species:Saccharomyces cerevisiae


Alignment Length:502 Identity:104/502 - (20%)
Similarity:166/502 - (33%) Gaps:164/502 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 HQLKDTTEPVHLNDSQASWFA------SVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAW 129
            |:|...|.    |||.:..:.      ..|||.                :.:|||:....||   
Yeast    23 HELNPETH----NDSNSDSYGLPQLSEKYNALR----------------QNRSLIIQQTEII--- 64

  Fly   130 ILLATPSESDQNAFFWQ--LIVSRFMLGVGMGLASAPPGVYAAEISVPKTRGSL-----ILGTSI 187
                   .|..|.::.|  |::|.|:.|.|.||......:|....:...:..||     ::...:
Yeast    65 -------GSAYNKWYLQAILLLSAFICGYGYGLDGNIRYIYTGYATSSYSEHSLLSTINVINAVV 122

  Fly   188 SVAGGI------------------TILYGIGYCIR----DDFRLIA---LICCGYQLVALLCVLP 227
            |.|..|                  .|||.:|..|:    |..|..|   ....||..|.|:.::.
Yeast   123 SAASQIIYARLSDVFGRLYLFISAVILYVVGTIIQSQAYDVQRYAAGAIFYNAGYVGVILILLII 187

  Fly   228 LPE--SHCWLLSKKRVTEAKRSLNYFRGFN---KSDEITH------------PQVLEEFQLLQKS 275
            |.:  |..|.|..:.|......:|.:...|   :::.:.:            |.......|....
Yeast   188 LSDFSSLKWRLLYQFVPTWPFIINTWIAGNITSRANPVVNWSWDVGMWAFIFPLSCVPIVLCMLH 252

  Fly   276 LQQRNTAVKESFWRNLHEPEVYKP----LVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPF 336
            :|.|  |.|...|..|...:.|..    :.||..||....:.|:.::           |..:.  
Yeast   253 MQWR--ARKTPEWHALKGQKSYYQEHGFIKILKQLFWMLDVVGVLLM-----------GCSLG-- 302

  Fly   337 MCAVLIGL------------ARLITTCPMGYIL---EW-WGRRRA-------------GIISTLG 372
              .:|:.|            :|||....:|::|   .| |..|.|             .:.|::|
Yeast   303 --CILVPLTLAGGVKTTWNDSRLIGPFVLGFVLIPILWIWEYRFARDPILPYRLVKDRAVWSSMG 365

  Fly   373 MSVCMFLLAGHSQIEILKEVPYLPVVAIVGF--IVLSTLGLYTL---------PFFMI-----SE 421
            :|   ||:    .........||..|.||..  .|.|...:.||         |||.:     :.
Yeast   366 IS---FLI----DFIYYMAADYLYTVMIVAVNESVKSATRIATLSSFVSTVASPFFALLVTRCTR 423

  Fly   422 LFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGV 468
            |.|..:.|.|..: ||:|:...|     ..|.:.:.|:.....::||
Yeast   424 LKPFIMFGCALWM-VAMGLLYHF-----RGGSQSHSGIIGALCVWGV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 104/502 (21%)
Sugar_tr 60..496 CDD:278511 104/502 (21%)
ARN1NP_011823.1 MFS_ARN_like 74..586 CDD:340880 88/421 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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