DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and ARN2

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_011816.2 Gene:ARN2 / 856338 SGDID:S000001039 Length:620 Species:Saccharomyces cerevisiae


Alignment Length:640 Identity:116/640 - (18%)
Similarity:209/640 - (32%) Gaps:244/640 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEQHQNLNQNGSESNGKQARIVSGLD------RLLKTPPPGEQTRAVRR-----------QVIAV 49
            |.:.....:..:|.|..:..:...:|      ..:|....|.::..:|:           |:.|:
Yeast     7 DNRSSQTKRKNTEKNCNELMVDEKMDDDSSPRDEMKDKLKGTKSLIIRKSELMAKKYDTWQLKAI 71

  Fly    50 IL--ANVGVFSTG---------MTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIGGL 103
            .|  |.:..|:.|         ||.||.:.:.|.|..|...:.|         .::|:|..|.|.
Yeast    72 FLFSAFICTFAYGLDSSIRGTYMTYAMNSYSAHSLISTVSVIVL---------MISAVSQVIFGG 127

  Fly   104 LSGFLLDRIGRKKSLIVLNVLIILAWILLATPSE--------------------------SDQNA 142
            ||    |..||....:|..||.|:..|:.:...:                          ||.::
Yeast   128 LS----DIFGRLTLFLVSIVLYIVGTIIQSQAYDVQRYAAGAVFYYVGLVGVMLQVVLMLSDNSS 188

  Fly   143 FFWQLIVSRFMLGVGMGLASAPPGVYAAEISVPKTRGSLILGT------SISVAGGITILYGIGY 201
            ..|:|..:         |..:.|.:....:|     ||::...      |.::|           
Yeast   189 LKWRLFYT---------LIPSWPSIITTWVS-----GSVVEAANPLENWSWNIA----------- 228

  Fly   202 CIRDDFRLIALICCGYQLVALLCVLPLPESHCWLLSK----KRVTEAKRSLNYFRGFNKSDEITH 262
                .:..|..:||   :..:||:|.:.    |.:..    |.:.:.|   :|::        ||
Yeast   229 ----MWAFIFPLCC---IPLILCMLHMR----WKVRNDVEWKELQDEK---SYYQ--------TH 271

  Fly   263 PQVLEEFQLLQK--------------------------SLQQRNTAVKESF------------WR 289
            ..|....||..|                          |...||:.:...|            |.
Yeast   272 GLVQMLVQLFWKLDVVGVLLFTAGVGCILVPLTLAGGVSTNWRNSKIIGPFVLGFVLVPGFIYWE 336

  Fly   290 N------------LHEPEVYKPLVILMSL-FAFQQLTG-IFVVIVFAVQISQEAG---IEIDPFM 337
            :            |.:..|:.||.|:..: |.:|...| ::.::|.||..|..:.   |.:..|:
Yeast   337 SRLALVPFAPFKLLKDRGVWAPLGIMFFICFVYQMAAGYLYTILVVAVDESASSATRIINLYSFV 401

  Fly   338 CAVLIGLARLITT-----------------CPMGYILEWWGRRRA--GIISTL---GMSVCMF-- 378
            .||:.....||.|                 ..||....:...:.|  |||:.:   |:|.|:|  
Yeast   402 TAVVAPFLGLIVTRSSRLKSYIIFGGSLYFITMGLFYRYRSGQDADGGIIAGMVIWGLSSCLFDY 466

  Fly   379 -------LLAGHSQIEILKEVPYLPVVAIVGFIVLSTLG-LYTLPFFMISELFPQKVR--GPASG 433
                   .:..|..:..:..:.| .|..|.|.:..:..| ::|      ..|:|:.:.  |.|..
Yeast   467 PTIVSIQSVTSHENMATVTALNY-TVFRIGGAVAAAISGAIWT------QSLYPKLLHYMGDADL 524

  Fly   434 LTVAVGMFISFV------------VLKTYPGIKEYLGMSNCFIIFGVMALFALIF 476
            .|.|.|..::|:            :::.|..:::|            ..:.||:|
Yeast   525 ATAAYGSPLTFILSNPWGTPVRSAMVEAYRHVQKY------------EVIVALVF 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 107/576 (19%)
Sugar_tr 60..496 CDD:278511 104/563 (18%)
ARN2NP_011816.2 MFS_ARN_like 69..581 CDD:340880 108/578 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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