DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and VBA5

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_013031.3 Gene:VBA5 / 853980 SGDID:S000001813 Length:582 Species:Saccharomyces cerevisiae


Alignment Length:536 Identity:115/536 - (21%)
Similarity:185/536 - (34%) Gaps:172/536 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NDSQASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQL 147
            |.|:..|..:..:|...|..|:.|.....||.:.||| |.:||..|..|:|..:.|..     .|
Yeast    70 NYSKTGWLVTGYSLPNAILSLIWGRFASIIGFQHSLI-LAILIFEAGSLIAALASSMN-----ML 128

  Fly   148 IVSRFMLGVG---------------MGLASAP--PGVYAAEISVPKTRGSLILG---TSIS---- 188
            |..|.:.|||               :|..|.|  ..:.:...:|....|.:|.|   |.::    
Yeast   129 IFGRVVAGVGGSGLQTLCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPIIGGAFTTHVTWRWC 193

  Fly   189 -----VAGGITILY----------GIGYCIRD------------------------------DFR 208
                 ..||:.|:.          ||...|:|                              ||.
Yeast   194 FYINLPIGGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRLMNGIIFKFDFF 258

  Fly   209 LIALICCGYQLVALLCVLPL-PESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHP--------- 263
            ..||  |...||..|..|.. ...:.|                    |....||:.         
Yeast   259 GFAL--CSAGLVLFLLGLTFGGNKYSW--------------------NSGQVITYLVLGVLLFIF 301

  Fly   264 QVLEEFQLLQK-SLQQRNTAVKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQ 327
            .::.:|.|..| :.:..|.:.:....|.|    |.||.:|::::..|...||....::::||..|
Yeast   302 SLVYDFFLFDKFNPEPDNISYRPLLLRRL----VAKPAIIIVNMVTFLLCTGYNGQMIYSVQFFQ 362

  Fly   328 --------EAGIEIDPFMCA-VLIGLARLITTCPMGYILEW------WGRRRAGII------STL 371
                    :||:.:.|.:.. |:..:|..:.|..:|.:...      .|...||::      ||.
Yeast   363 LIFASSAWKAGLHLIPIVITNVIAAIASGVITKKLGLVKPLLIFGGVLGVIGAGLMTLMTNTSTK 427

  Fly   372 GMSVCMFLLAGHS------------QIEILKEVP-----YLPVVAIVGFI--VLSTLG--LYTLP 415
            ...:.:.||.|.|            |::|.|:.|     ::.|.|...|:  :.:|||  |.|..
Yeast   428 STQIGVLLLPGFSLGFALQASLMSAQLQITKDRPEAAMDFIEVTAFNTFMKSLGTTLGGVLSTTV 492

  Fly   416 FFMISELFPQKVR----GPASGLTVAVGMFISFVVLKTYPGIKEYLG------MSNCFIIFGVMA 470
            |   |..|..||.    .|..|.||...:...   |:.|.|....:|      :.|.|  :..:.
Yeast   493 F---SASFHNKVSRAHLEPYEGKTVDDMILYR---LQNYDGSHSTIGNILSDSIKNVF--WMDLG 549

  Fly   471 LFALIFVYLALPETRR 486
            .:||.|::.:....::
Yeast   550 FYALGFLFCSFSSNKK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 115/527 (22%)
Sugar_tr 60..496 CDD:278511 115/536 (21%)
VBA5NP_013031.3 MFS_Azr1_MDR_like 43..493 CDD:341045 97/454 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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