DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8249 and VBA2

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_009852.3 Gene:VBA2 / 852596 SGDID:S000000497 Length:474 Species:Saccharomyces cerevisiae


Alignment Length:434 Identity:76/434 - (17%)
Similarity:150/434 - (34%) Gaps:131/434 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 SQASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQLIV 149
            |.::|..:...:::.....|.|...|.:||:..|...|....:..:.......      .:.|..
Yeast     2 SISNWITTAYLITSTSFQPLYGSFSDALGRRNCLFFANGAFTIGCLACGFSKN------IYMLSF 60

  Fly   150 SRFMLGVGMGLASAPPGVYAAEISVPKTRG------SLILGTSISVAG---GITILYGIGYCIRD 205
            .|.:.|:|.|.......:..:::.....||      :|:||.. ::.|   |.||...||:    
Yeast    61 MRALTGIGGGGLITLSTIVNSDVIPSSKRGIFQAFQNLLLGFG-AICGASFGGTIASSIGW---- 120

  Fly   206 DFRLIALICCGYQLVALLCVLPLPESHCWLLSKKRVTEAKRSLNYFRGFNKSDEITHPQVLEEFQ 270
                                     ..|:|:.......:...:||:          .|.      
Yeast   121 -------------------------RWCFLIQVPISVISSILMNYY----------VPN------ 144

  Fly   271 LLQKSLQQRNTAVKESFWRNLHEPEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDP 335
              ||...::|:::.::..:.|.:.:|...::|         :||:.:.:::.            .
Yeast   145 --QKEYNRQNSSIFQNPGKILRDIDVMGSILI---------ITGLTLQLLYL------------S 186

  Fly   336 FMCAVLIGLARLITTCPMGYILEWWGRRRAGIISTLGMSVCMFLLAGHSQ---------IEILK- 390
            ..|:.    ::|..|.|...:|            .:|..:.:.|...|.:         :|::. 
Yeast   187 LGCST----SKLSWTSPSVLLL------------LVGSVIILLLFILHERKTSARAIIPMELVNS 235

  Fly   391 --EVPYLPVVAIVGFIVLSTLGLYTLPFFMISELFPQKVRGPA---SGLTVAV-GMFISFVVLKT 449
              .|..|.:..:|||  .|...|:|||      ||.|.|.|.:   :||.:.: .:|.....|.|
Yeast   236 SYSVVVLSISILVGF--ASYAYLFTLP------LFFQIVLGDSTAKAGLRLTIPSLFTPVGSLIT 292

  Fly   450 YPGIKEYLGMSNC---FIIFGVMALFALIFVYLALPETRRRTLL 490
            ...:.:|    ||   .:..|:..:|...|::|.:.:|....|:
Yeast   293 GFSMSKY----NCLRLLLYIGISLMFLGNFLFLFIEKTSPNWLI 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 73/421 (17%)
Sugar_tr 60..496 CDD:278511 76/434 (18%)
VBA2NP_009852.3 MFS 1..384 CDD:421695 76/434 (18%)
TRI12 <107..>249 CDD:115279 30/225 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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