DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8249 and ITR1

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:502 Identity:118/502 - (23%)
Similarity:220/502 - (43%) Gaps:43/502 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VIAVILANVGVFSTGMTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIGGLLSGFLLD 110
            :....:|::..|..|......::.|..:....:...|...:.....:..:|.|.|..:.:|...|
Yeast    87 ITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAAD 151

  Fly   111 RIGRKKSLIVLNVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVP 175
            ..|||:.|:..|::.::..||..:...      |||:.|.|.::|.|:|:.|....::.:||:..
Yeast   152 IFGRKRCLMGSNLMFVIGAILQVSAHT------FWQMAVGRLIMGFGVGIGSLIAPLFISEIAPK 210

  Fly   176 KTRGSLILGTSISVAGGITILYGIG----YCIRDDFRLIALICCGYQLVALLCVLPLPESHCWLL 236
            ..||.|.:..|:.:.||..:.||.|    | :.:.:|::..:......|...|:..||::..:.:
Yeast   211 MIRGRLTVINSLWLTGGQLVAYGCGAGLNY-VNNGWRILVGLSLIPTAVQFTCLCFLPDTPRYYV 274

  Fly   237 SK---KRVTEA-KRSLNYFRGFNKSDEITHPQVLEEFQLLQKSLQQRNTAVKESFWRNLHE---- 293
            .|   .|.||. |||..     :.|:||...:| ||...|.:|:..:|  |.|..|..:.|    
Yeast   275 MKGDLARATEVLKRSYT-----DTSEEIIERKV-EELVTLNQSIPGKN--VPEKVWNTIKELHTV 331

  Fly   294 PEVYKPLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPMGYILE 358
            |...:.|:|...|.|.||.||...::.|:..|.:..|.: :....::::.....|.|....:.::
Yeast   332 PSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFK-NSSAVSIIVSGTNFIFTLVAFFSID 395

  Fly   359 WWGRRRAGIISTLGMSVCMFL--LAGH-------SQIEILKEVPY-----LPVVAIVGFIVLSTL 409
            ..|||...:|...||::.:.:  :|.|       ..:.::....:     :.:|.|:.|.....|
Yeast   396 KIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYAL 460

  Fly   410 GLYTLPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMALFAL 474
            |:.|:| :..||||||.|||..:....|.....|.|:..|:..:.:.:..:..|..|..::..:.
Yeast   461 GIGTVP-WQQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLST 524

  Fly   475 IFVYLALPETRRRTLLEIEEQFRSGRSKSQNQADVEMKEVFVRKPEE 521
            ||.|...||.....|.|::...:.|.:...::|..:.::..|.:..|
Yeast   525 IFCYFCYPELSGLELEEVQTILKDGFNIKASKALAKKRKQQVARVHE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 109/455 (24%)
Sugar_tr 60..496 CDD:278511 112/461 (24%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 110/457 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342433
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2521
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.690

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