DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and RGT2

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:544 Identity:127/544 - (23%)
Similarity:228/544 - (41%) Gaps:92/544 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEQHQNLNQNGSESNGKQARIVSGLDRLLKTPPPGEQTRAVRRQVIAVILANVGVFST--GMTLA 64
            |.....::...:|..|..|  :.....||..|.|      :|..|::|:   ||:|..  |....
Yeast    61 DPNAYQISYTNNEPAGDGA--IETTSILLSQPLP------LRSNVMSVL---VGIFVAVGGFLFG 114

  Fly    65 MPTATLHQLKDT------TEPVH--LNDSQASWFASVNALSAPIGGLLSGFLLDRIGRKKSLIVL 121
            ..|..::.:.|.      ..|.|  ...||.:...|..:|....|.|::.::.|..|||.:::..
Yeast   115 YDTGLINSITDMPYVKTYIAPNHSYFTTSQIAILVSFLSLGTFFGALIAPYISDSYGRKPTIMFS 179

  Fly   122 NVLIILAWILLATPSESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVPKTRGSLILGTS 186
            ..:|......|...|..     ...|||.|.:.|:|:|:.||...:|.||.:....||::|....
Yeast   180 TAVIFSIGNSLQVASGG-----LVLLIVGRVISGIGIGIISAVVPLYQAEAAQKNLRGAIISSYQ 239

  Fly   187 ISVAGGITILYGIGYCIR-----DDFRLIALICCGYQLV--ALLCV--LPLPESHCWLLSKKRVT 242
            .::..|:.:...:.....     ..:|    |..|.|.|  ::|.|  :.||||..:.:.|..:.
Yeast   240 WAITIGLLVSSAVSQGTHSKNGPSSYR----IPIGLQYVWSSILAVGMIFLPESPRYYVLKDELN 300

  Fly   243 EAKRSLNYFRGFNKSDEITHPQVLEEFQLLQKSLQQR----NTAVKESFWRNLHEPEVYKPLVIL 303
            :|.:||::.||.    .|..|::|||...::.:....    .:.:.:.|..:.:.|:....:...
Yeast   301 KAAKSLSFLRGL----PIEDPRLLEELVEIKATYDYEASFGPSTLLDCFKTSENRPKQILRIFTG 361

  Fly   304 MSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLIGLARLITTCPMGYILEWWGRRRAGII 368
            :::.||||.:||..:..:.|......|:: :.::.:.:.....:..:.|..|:::..|||..   
Yeast   362 IAIQAFQQASGINFIFYYGVNFFNNTGVD-NSYLVSFISYAVNVAFSIPGMYLVDRIGRRPV--- 422

  Fly   369 STLGMSVCMFLLAGHSQIEILKEVPYLPVVAIVGF----------IVLSTLGLYTLPF------- 416
                      ||||    .::..:..| |:||||.          |:::.:.|:...|       
Yeast   423 ----------LLAG----GVIMAIANL-VIAIVGVSEGKTVVASKIMIAFICLFIAAFSATWGGV 472

  Fly   417 -FMIS-ELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEY------LGMSNCFIIFGVMALFA 473
             :::| ||:|..||...:.:..|....::|......|.|.:.      :| ...|.|:|.:.:.|
Yeast   473 VWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMG-PKIFFIWGGLNVVA 536

  Fly   474 LIFVYLALPETRRRTLLEIEEQFR 497
            :|.||.|:.|||..||.||:|.||
Yeast   537 VIVVYFAVYETRGLTLEEIDELFR 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 105/477 (22%)
Sugar_tr 60..496 CDD:278511 111/481 (23%)
RGT2NP_010143.1 SP 76..555 CDD:273317 120/522 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342630
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
43.740

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