DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8249 and INT4

DIOPT Version :9

Sequence 1:NP_001246349.1 Gene:CG8249 / 36742 FlyBaseID:FBgn0034045 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001328028.1 Gene:INT4 / 827346 AraportID:AT4G16480 Length:582 Species:Arabidopsis thaliana


Alignment Length:565 Identity:128/565 - (22%)
Similarity:224/565 - (39%) Gaps:126/565 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ANVGVFSTGMTLAMPTATLHQLKDTTEPVHLNDSQASWFASVNALSAPIGGLLSGFLLDRIGRKK 116
            |.:|....|....:.:..|..:|:..:.|.......|...|:....|.:|..:.|::.|:.||:.
plant    34 AGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGAAVGGWINDKFGRRM 98

  Fly   117 SLIVLNVLIILAWILLA-TPSESDQNAFFWQLIVSRFMLGVGMGLASAPPGVYAAEISVPKTRGS 180
            |:::.:||.::..|::| .|:.       |.:||.|..:|.|:|:||....:|.:|.|..:.||:
plant    99 SILIADVLFLIGAIVMAFAPAP-------WVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGA 156

  Fly   181 LILGTSISVAGGITILYGIGYCI---RDDFRLIALICCGYQLVALLCVLPLPESHCWLLSKKRVT 242
            |:....:.:.||....|.|....   ...:|.:..:.....:|..:.:|.||||..||..|.|:.
plant   157 LVSTNGLLITGGQFFSYLINLAFVHTPGTWRWMLGVAGVPAIVQFVLMLSLPESPRWLYRKDRIA 221

  Fly   243 EAKRSLNYFRGFNKSDEITHP--QVLEEFQLLQKSLQQR---NTAVKESFWRNLH----EPEVYK 298
            |::..|          |..:|  :|..|.:.|:.|::..   ...:.:||...|.    .|.|.:
plant   222 ESRAIL----------ERIYPADEVEAEMEALKLSVEAEKADEAIIGDSFSAKLKGAFGNPVVRR 276

  Fly   299 PLVILMSLFAFQQLTGIFVVIVFAVQISQEAGIEIDPFMCAVLI---GLARLITTCPMGYILEWW 360
            .|...:::...||..||..|:.::..|.|.||...:....|:.:   ||..|.:...|.:: :.:
plant   277 GLAAGITVQVAQQFVGINTVMYYSPSIVQFAGYASNKTAMALSLITSGLNALGSIVSMMFV-DRY 340

  Fly   361 GRRRAGIISTLGMSVCMFLLAG-HSQIEI------------------------------------ 388
            |||:..|||..|:..|:.:||. .||..|                                    
plant   341 GRRKLMIISMFGIIACLIILATVFSQAAIHAPKIDAFESRTFAPNATCSAYAPLAAENAPPSRWN 405

  Fly   389 ----LKE---------VPYLPVVAIV-------------------------GFIVLSTLGLY--- 412
                |:.         .||.|...:|                         ||:.:..||||   
plant   406 CMKCLRSECGFCASGVQPYAPGACVVLSDDMKATCSSRGRTFFKDGCPSKFGFLAIVFLGLYIVV 470

  Fly   413 ------TLPFFMISELFPQKVRGPASGLTVAVGMFISFVVLKTYPGIKEYLGMSNCFIIFGVMAL 471
                  |:|:.:.||::|.:.||...|:........:.:|.:::..:...||.|..|::|...:.
plant   471 YAPGMGTVPWIVNSEIYPLRYRGLGGGIAAVSNWVSNLIVSESFLSLTHALGSSGTFLLFAGFST 535

  Fly   472 FALIFVYLALPETRRRTLLEIEEQFRSG--------RSKSQNQAD 508
            ..|.|::|.:|||:.....|:|:....|        |.|...:.|
plant   536 IGLFFIWLLVPETKGLQFEEVEKLLEVGFKPSLLRRREKKGKEVD 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8249NP_001246349.1 MFS 49..479 CDD:119392 118/526 (22%)
Sugar_tr 60..496 CDD:278511 122/535 (23%)
INT4NP_001328028.1 MFS_HMIT_like 33..547 CDD:340918 119/530 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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